RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 DEAF1O75398 565 aaPredicted RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 SERPINA4P29622 427 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TMED10P49755 219 aaKnown RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 GALNT3Q14435 633 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 SLC10A6Q3KNW5 377 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 RAB6CQ53S08 254 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TIFABQ6ZNK6 161 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 DET1Q7L5Y6 550 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 AHI1Q8N157 1196 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 MZB1Q8WU39 189 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 CORO1BQ9BR76 489 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 RAB6CQ9H0N0 254 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 DPEP3Q9H4B8 488 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 NOL11Q9H8H0 719 aaKnown RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 MRPL17Q9NRX2 175 aaKnown RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 MKS1Q9NXB0 559 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 OPTCQ9UBM4 332 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 PSAT1Q9Y617 370 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 SDK1Q7Z5N4 2213 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 MYOCOSA0A1B0GUC4 107 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 KCNU1A8MYU2 1149 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 IFRD1O00458 451 aaPredicted RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 FFAR3O14843 346 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 GPR42O15529 346 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 ALDH1A2O94788 518 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 WDR47O94967 919 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 RPL26P61254 145 aaKnown RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 ITGA7Q13683 1181 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 PLCL1Q15111 1095 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 FAM43BQ6ZT52 329 aaPredicted RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TOP6BLQ8N6T0 577 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 ARFGAP1Q8N6T3 406 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 RDH11Q8TC12 318 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 MFSD3Q96ES6 412 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 IGFLR1Q9H665 355 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 CLK4Q9HAZ1 481 aaKnown RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 STX16-NPEPL1H3BU86 382 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 OR56A5P0C7T3 313 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 CTPS1P17812 591 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TYMPP19971 482 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 GRK3P35626 688 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 C21orf59P57076 290 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TAF10Q12962 218 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 DPYSQ14117 519 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TLR1Q15399 786 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 CRY1Q16526 586 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 OTOP3Q7RTS5 596 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TRAPPC5Q8IUR0 188 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 LRTOMTQ8WZ04 291 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 PIWIL1Q96J94 861 aaKnown RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 H3BSA7 217 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZBTB14O43829 449 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 TIPRLO75663 272 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ALDOAP04075 364 aaKnown RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 NTRK1P04629 796 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 SNRPB2P08579 225 aaKnown RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CYP2A7P20853 494 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ATP5F1P24539 256 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 NDUFV1P49821 464 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CLCNKBP51801 687 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 HK2P52789 917 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CSTF3Q12996 717 aaKnown RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 TRIM16LQ309B1 348 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 STXBP5Q5T5C0 1151 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 MFSD4BQ5TF39 518 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF621Q6ZSS3 439 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 STRADAQ7RTN6 431 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 MON1AQ86VX9 555 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 FAM9CQ8IZT9 166 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 BTN2A2Q8WVV5 523 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF558Q96NG5 402 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 DNAAF2Q9NVR5 837 aaKnown RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CNTN3Q9P232 1028 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 TBC1D3BA6NDS4 549 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 RGS5O15539 181 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CA12O43570 354 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 DAB1O75553 588 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 SMPD1P17405 629 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 LMO2P25791 158 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 L1CAMP32004 1257 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 MTTPP55157 894 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 FRG1Q14331 258 aaKnown RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 SQLEQ14534 574 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 SLC9A4Q6AI14 798 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 EPGNQ6UW88 154 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZBTB46Q86UZ6 589 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF567Q8N184 647 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 KLHL23Q8NBE8 558 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 PKP2Q99959 881 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 TMCC3Q9ULS5 477 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 TBL1XO60907 577 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 GMPRP36959 345 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 LILRA4P59901 499 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 RAB10P61026 200 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 PFKPQ01813 784 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 MBTD1Q05BQ5 628 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 GRM3Q14832 879 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 FBXL19Q6PCT2 694 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CDYL2Q8N8U2 506 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms