RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 SH2D7A6NKC9 451 aaPredicted RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 MAGEB17A8MXT2 336 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 A8MZ25 164 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 TMEM233B4DJY2 109 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 E7ENQ6 273 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 TNFSF11O14788 317 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 RNMTO43148 476 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 HSPA12AO43301 675 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 XPOTO43592 962 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 DTNBO60941 627 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 STAM2O75886 525 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 SLITRK3O94933 977 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 KAT7O95251 611 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ALDOAP04075 364 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 THEGLP0DJG4 465 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 NR2C1P13056 603 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 GP1BBP13224 206 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 EGR1P18146 543 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 POLR2CP19387 275 aaPredicted RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 AGXTP21549 392 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 MDKP21741 143 aaPredicted RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 FASP25445 335 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ITGA3P26006 1051 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 GIFP27352 417 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 PIGAP37287 484 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 GPR3P46089 330 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 LIG4P49917 911 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 HCFC1P51610 2035 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 PPIAP62937 165 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ADORA2A-AS1P86434 159 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 CD300CQ08708 224 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 MTAPQ13126 283 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 SLC13A2Q13183 592 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 CTBP1Q13363 440 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 SQSTM1Q13501 440 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 CAPSQ13938 189 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 SLC29A2Q14542 456 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 CNN3Q15417 329 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 LY6EQ16553 131 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 TAZQ16635 292 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 C5orf22Q49AR2 442 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF691Q5VV52 312 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 RNLSQ5VYX0 342 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 OR7E24Q6IFN5 339 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ACSM6Q6P461 480 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZDHHC24Q6UX98 284 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 CDHR3Q6ZTQ4 885 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 HACE1Q8IYU2 909 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 OR6B3Q8NGW1 331 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 MRAPQ8TCY5 172 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 U2AF1L4Q8WU68 220 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZFAND2BQ8WV99 257 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 KBTBD7Q8WVZ9 684 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ATOH1Q92858 354 aaPredicted RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 RBMXL1Q96E39 390 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 PELI1Q96FA3 418 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 C1orf147Q96MC9 270 aaPredicted RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 DEPDC7Q96QD5 511 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 SRPK1Q96SB4 655 aaKnown RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 MPHOSPH8Q99549 860 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 MTMR12Q9C0I1 747 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 WWTR1Q9GZV5 400 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ARMT1Q9H993 441 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 GNB4Q9HAV0 340 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 GPN1Q9HCN4 374 aaPredicted RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF277Q9NRM2 450 aaPredicted RBP-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 FBXO28Q9NVF7 368 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ERAP1Q9NZ08 941 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 TINAGQ9UJW2 476 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF229Q9UJW7 825 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 OR2W1Q9Y3N9 320 aa-0.17□□□□□ -2.44
SNORA40.17-201ENST00000517256 SYNE1Q8NF91 8797 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 MEX3AA1L020 520 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 KCNJ18B7U540 433 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 BTN3A1O00481 513 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 SLC16A6O15403 523 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNHIT1O43257 154 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 KBTBD11O94819 623 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 ASMTLO95671 621 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 PNMTP11086 282 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 MYOD1P15172 320 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 TBPP20226 339 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 CDK11BP21127 795 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 C5AR1P21730 350 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 PRKACGP22612 351 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 NR2F2P24468 414 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 AXLP30530 894 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 CDH5P33151 784 aaPredicted RBP-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 HSPA4P34932 840 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 KIR3DL2P43630 455 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 GPR12P47775 334 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 PSMD8P48556 350 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 TMEM50BP56557 158 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 EWSR1Q01844 656 aaKnown RBP eCLIP-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF33BQ06732 778 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 KLF1Q13351 362 aaPredicted RBP-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 SERINC3Q13530 473 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 PRKG1Q13976 671 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 KCNAB1Q14722 419 aa-0.18□□□□□ -2.44
SNORA40.17-201ENST00000517256 EFNB3Q15768 340 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms