RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 KRTAP5-7Q6L8G8 165 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CXorf57Q6NSI4 855 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ERAP2Q6P179 960 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KLHL17Q6TDP4 642 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LRIG3Q6UXM1 1119 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ATF7IPQ6VMQ6 1270 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RBMS3Q6XE24 437 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FOXL2NBQ6ZUU3 175 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TUBA1AQ71U36 451 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PRSS45Q7RTY3 260 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TIPARPQ7Z3E1 657 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF804AQ7Z570 1209 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SRGAP1Q7Z6B7 1085 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CCDC117Q8IWD4 279 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM114A1Q8IWE2 563 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 UEVLDQ8IX04 471 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZC3H3Q8IXZ2 948 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM186BQ8IYM0 893 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPAG16Q8N0X2 631 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPICE1Q8N0Z3 855 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPATA6LQ8N4H0 392 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TCP11L2Q8N4U5 519 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GBGT1Q8N5D6 347 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PCDH20Q8N6Y1 951 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RTL3Q8N8U3 475 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BMPERQ8N8U9 685 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF383Q8NA42 475 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CCDC150Q8NCX0 1101 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SRFBP1Q8NEF9 429 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MCPH1Q8NEM0 835 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DNAAF1Q8NEP3 725 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C17orf47Q8NEP4 570 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OR2T6Q8NHC8 308 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FLVCR1-AS1Q8TAF5 88 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 THAP4Q8WY91 577 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NCSTNQ92542 709 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HSPH1Q92598 858 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 APBB2Q92870 758 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 WBP2Q969T9 261 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EVI5LQ96CN4 794 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MAELQ96JY0 434 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KLHL15Q96M94 604 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF582Q96NG8 517 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NECTIN4Q96NY8 510 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NUP88Q99567 741 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLX1AQ9BQ83 275 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SOSTQ9BQB4 213 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TUBA1CQ9BQE3 449 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MXRA8Q9BRK3 442 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NUDT22Q9BRQ3 303 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HERPUD2Q9BSE4 406 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMEM204Q9BSN7 226 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RTKNQ9BST9 563 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CCDC28BQ9BUN5 200 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SF3B5Q9BWJ5 86 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CADM1Q9BY67 442 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM129AQ9BZQ8 928 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TM6SF1Q9BZW5 370 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TRIM2Q9C040 744 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SIK2Q9H0K1 926 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC25A18Q9H1K4 315 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 S1PR5Q9H228 398 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MMP28Q9H239 520 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PPIL3Q9H2H8 161 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NDST4Q9H3R1 872 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 IKZF5Q9H5V7 419 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BICC1Q9H694 974 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ATP13A3Q9H7F0 1226 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PPP1R3EQ9H7J1 279 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EVA1AQ9H8M9 152 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ACTR5Q9H9F9 607 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KIF9Q9HAQ2 790 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC28A3Q9HAS3 691 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NOD2Q9HC29 1040 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MAGEE1Q9HCI5 957 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PNPLA8Q9NP80 782 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF71Q9NQZ8 489 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPHK2Q9NRA0 654 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLCXD1Q9NUJ7 323 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 INTS9Q9NV88 658 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMEM30AQ9NV96 361 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLK2Q9NYY3 685 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KIF17Q9P2E2 1029 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 THAP10Q9P2Z0 257 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 COPG2Q9UBF2 871 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 STK39Q9UEW8 545 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLCO3A1Q9UIG8 710 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TUBE1Q9UJT0 475 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RNF150Q9ULK6 438 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FZD10Q9ULW2 581 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OSGIN2Q9Y236 505 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CNPY2Q9Y2B0 182 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 R3HDM2Q9Y2K5 976 aaKnown RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KLHL20Q9Y2M5 609 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PPP2R2CQ9Y2T4 447 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPEF1Q9Y4P9 236 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CEP83Q9Y592 693 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PIAS3Q9Y6X2 628 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SOS1Q07889 1333 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPATA31A5Q5VU36 1347 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms