RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 KLHL24Q6TFL4 600 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 TMCO3Q6UWJ1 677 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 PRSS57Q6UWY2 283 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 TMTC3Q6ZXV5 915 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 KRT74Q7RTS7 529 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 ADGRG6Q86SQ4 1221 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 AADATQ8N5Z0 425 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 GDPD5Q8WTR4 605 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 NOC3LQ8WTT2 800 aaKnown RBP3.32□□□□□ -1.88
HERC4-215ENST00000515753 TMEM255BQ8WV15 326 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 YME1L1Q96TA2 773 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 EYA3Q99504 573 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 FUZQ9BT04 418 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 TMEM51Q9NW97 253 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 SLC25A10Q9UBX3 287 aaPredicted RBP3.32□□□□□ -1.88
HERC4-215ENST00000515753 VPS28Q9UK41 221 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 HSF4Q9ULV5 492 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 CYP46A1Q9Y6A2 500 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 DISP1Q96F81 1524 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 IQGAP2Q13576 1575 aa3.32□□□□□ -1.88
HERC4-215ENST00000515753 ARAP3Q8WWN8 1544 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 NEO1Q92859 1461 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 A0A1B0GUV1 79 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 CPED1A4D0V7 1026 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 KDM4EB2RXH2 506 aaPredicted RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 NTN3O00634 580 aaPredicted RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 AHCYL1O43865 530 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 KCNJ13O60928 360 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 GAGE7O76087 117 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 DDNO94850 711 aaPredicted RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 HEXAP06865 529 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 GAGE12FP0CL80 117 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 GAGE12GP0CL81 117 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 GAGE12IP0CL82 117 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 ACADMP11310 421 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 PCNAP12004 261 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 ZNF12P17014 697 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 ITGAXP20702 1163 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 C21orf33P30042 268 aaPredicted RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 CXCR3P49682 368 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 CCR9P51686 369 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 TERF1P54274 439 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 BNC1Q01954 994 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 CYP4A11Q02928 519 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 GAGE1Q13065 139 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 GAGE4Q13068 117 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 TRAF3Q13114 568 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 EIF4A2Q14240 407 aaKnown RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 PSMD6Q15008 389 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 GPR68Q15743 365 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 PRICKLE4Q2TBC4 344 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 EDRF1Q3B7T1 1238 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 CCDC184Q52MB2 194 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 PPP6R3Q5H9R7 873 aaPredicted RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 CFAP58Q5T655 872 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 C1QTNF12Q5T7M4 302 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 SLC9C2Q5TAH2 1124 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 MFSD4BQ5TF39 518 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 SERTAD4-AS1Q5TG53 156 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 FAM69BQ5VUD6 431 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 C9orf57Q5W0N0 161 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 CREB3L2Q70SY1 520 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 ENOSF1Q7L5Y1 443 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 FAM160B2Q86V87 743 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 CHD1LQ86WJ1 897 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 MB21D2Q8IYB1 491 aaPredicted RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 NGEFQ8N5V2 710 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 MIGA1Q8NAN2 632 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 C11orf65Q8NCR3 313 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 RASSF8Q8NHQ8 419 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 ZCCHC10Q8TBK6 192 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 TRIB2Q92519 343 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 NSUN4Q96CB9 384 aaKnown RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 RNF125Q96EQ8 232 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 INTS2Q9H0H0 1204 aaKnown RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 ALDH8A1Q9H2A2 487 aaPredicted RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 PDCL3Q9H2J4 239 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 GHITMQ9H3K2 345 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 PPP1R14DQ9NXH3 145 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 KIAA1456Q9P272 454 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 CNOT7Q9UIV1 285 aaKnown RBP3.31□□□□□ -1.88
HERC4-215ENST00000515753 CARD8Q9Y2G2 431 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.31□□□□□ -1.88
HERC4-215ENST00000515753 PCDHGB5Q9Y5G0 923 aa3.31□□□□□ -1.88
HERC4-215ENST00000515753 NOTCH3Q9UM47 2321 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 HSPB2A8KAH6 182 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 TIMM23O14925 209 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 DOK2O60496 412 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 DKC1O60832 514 aaKnown RBP eCLIP3.3□□□□□ -1.88
HERC4-215ENST00000515753 SERPINI2O75830 405 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 NDUFB4O95168 129 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 HSPA1AP0DMV8 641 aaKnown RBP3.3□□□□□ -1.88
HERC4-215ENST00000515753 HSPA1BP0DMV9 641 aaKnown RBP3.3□□□□□ -1.88
HERC4-215ENST00000515753 DAOP14920 347 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 CD58P19256 250 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 GPTP24298 496 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 PGM1P36871 562 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 ROR1Q01973 937 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 CAPSQ13938 189 aa3.3□□□□□ -1.88
HERC4-215ENST00000515753 PLCB4Q15147 1175 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms