RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FAM183BPQ6ZVS7 135 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 C2orf69Q8N8R5 385 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 ANKLE1Q8NAG6 615 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 ZNF680Q8NEM1 530 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 UBA3Q8TBC4 463 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 MZB1Q8WU39 189 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 KIF12Q96FN5 646 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 HPDLQ96IR7 371 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 TGS1Q96RS0 853 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 DCUN1D5Q9BTE7 237 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 TMEM106CQ9BVX2 250 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 UGT1A7Q9HAW7 530 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 UGT1A10Q9HAW8 530 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 UGT1A8Q9HAW9 530 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 MAT2BQ9NZL9 334 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 LUZP4Q9P127 313 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 TSR3Q9UJK0 312 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 USP18Q9UMW8 372 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 C2CD4BA6NLJ0 364 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 PRRT4C9JH25 899 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 APOC4-APOC2K7ER74 178 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 AKAP10O43572 662 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 SNAI1O95863 264 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 IFNB1P01574 187 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 APOC2P02655 101 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 HOXD8P13378 290 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 EPB42P16452 691 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 YBX3P16989 372 aaKnown RBP eCLIP7.5□□□□□ -1.216e-7■■□□□ 12.3
PDLIM5-219ENST00000514743 ZNF143P52747 638 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 MMRN1Q13201 1228 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 TMEM132DQ14C87 1099 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 UTS2BQ765I0 119 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 CAMK1DQ8IU85 385 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 C4orf33Q8N1A6 199 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 PPM1NQ8N819 430 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 GRAMD1AQ96CP6 724 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 MAGEB18Q96M61 343 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 DHRS4Q9BTZ2 278 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 SLC2A11Q9BYW1 496 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 FRMD8P1Q9BZ68 369 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 SYBUQ9NX95 663 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 GTF2IRD1Q9UHL9 959 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 ITGA11Q9UKX5 1188 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 SNX6Q9UNH7 406 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 AKT3Q9Y243 479 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 ERGIC3Q9Y282 383 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 CAB39Q9Y376 341 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 RAD54BQ9Y620 910 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 CEPT1Q9Y6K0 416 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 DOCK3Q8IZD9 2030 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 E5RJQ4 531 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 PIK3R2O00459 728 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 PPEF2O14830 753 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 MAGEB2O15479 319 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 PRPF4O43172 522 aaKnown RBP eCLIP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 KRT8P05787 483 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 TAC1P20366 129 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 HARS2P49590 506 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 PPM1FP49593 454 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 CDK9P50750 372 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 RNF4P78317 190 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 PDIA2Q13087 525 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 DUSP4Q13115 394 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 ELOAQ14241 798 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 MAPKAPK3Q16644 382 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 EFHC2Q5JST6 749 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 ATAD3BQ5T9A4 648 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 LCLAT1Q6UWP7 414 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 NPNTQ6UXI9 565 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 FRA10AC1Q70Z53 315 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 BEND7Q8N7W2 519 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 C12orf29Q8N999 325 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 KHSRPQ92945 711 aaKnown RBP eCLIP7.5□□□□□ -1.211e-6■■■■□ 20.4
PDLIM5-219ENST00000514743 C12orf57Q99622 126 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 TFB2MQ9H5Q4 396 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 GBA2Q9HCG7 927 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 GDAP2Q9NXN4 497 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 DPP3Q9NY33 737 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 TAGLN3Q9UI15 199 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 TSPAN16Q9UKR8 245 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 DERAQ9Y315 318 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 MAU2Q9Y6X3 613 aa7.5□□□□□ -1.21
PDLIM5-219ENST00000514743 ERVH48-1M5A8F1 160 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 TNFRSF10BO14763 440 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 TYROBPO43914 113 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 PIP5K1CO60331 668 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 JRKO75564 520 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 NDUFV2P19404 249 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 SOX6P35712 828 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 SERPINB5P36952 375 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 SULT1E1P49888 294 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 DPYSL3Q14195 570 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 KYAT1Q16773 422 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 HADHQ16836 314 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 FAM102AQ5T9C2 384 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 AGAP7PQ5VUJ5 663 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 RNF43Q68DV7 783 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 ARSKQ6UWY0 536 aa7.49□□□□□ -1.21
PDLIM5-219ENST00000514743 PPIL6Q8IXY8 311 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms