RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 Q6ZVL8 140 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 DCP2Q8IU60 420 aaKnown RBP13.96□□□□□ -0.17
USP46-209ENST00000514536 SLC22A18ASQ8N1D0 253 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 PLA2G15Q8NCC3 412 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 IPMKQ8NFU5 416 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 MRGPRX2Q96LB1 330 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 FRMD8P1Q9BZ68 369 aaPredicted RBP13.96□□□□□ -0.17
USP46-209ENST00000514536 ERVMER34-1Q9H9K5 563 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 ZNF148Q9UQR1 794 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 ANKRD36A6QL64 1941 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 CACNA1EQ15878 2313 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 C1orf232A0A0U1RR37 186 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 LOC285095A0A1B0GVY8 99 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 PSMD11O00231 422 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 ANXA9O76027 345 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 PIRTP0C851 137 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 ZNF883P0CG24 379 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 ZNF30P17039 623 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 STIP1P31948 543 aaKnown RBP13.96□□□□□ -0.18
USP46-209ENST00000514536 CCT8P50990 548 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 GEMP55040 296 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 SLC14A1Q13336 389 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 MPP3Q13368 585 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 PRPSAP1Q14558 356 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 SHBQ15464 509 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 CDKN3Q16667 212 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 ZNF542PQ5EBM4 170 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 TPRG1LQ5T0D9 272 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 TECPR1Q7Z6L1 1165 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 SLC25A41Q8N5S1 370 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 MAIP1Q8WWC4 291 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 NUS1Q96E22 293 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 PBKQ96KB5 322 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 LYSMD1Q96S90 227 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 GORASP1Q9BQQ3 440 aa13.96□□□□□ -0.18
USP46-209ENST00000514536 SPTY2D1-AS1A0A0U1RR47 76 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 GCATO75600 419 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 EPOP01588 193 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 C1SP09871 688 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 CHRNA4P43681 627 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
USP46-209ENST00000514536 RXRGP48443 463 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 ARRB1P49407 418 aaPredicted RBP13.95□□□□□ -0.18
USP46-209ENST00000514536 STC1P52823 247 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 THOP1P52888 689 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 BNIP3Q12983 259 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 FZD2Q14332 565 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 OASLQ15646 514 aaKnown RBP13.95□□□□□ -0.18
USP46-209ENST00000514536 CCNG2Q16589 344 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 PNCKQ6P2M8 343 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 ARHGEF18Q6ZSZ5 1173 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 PELI3Q8N2H9 469 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 OXR1Q8N573 874 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 DTD2Q96FN9 168 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 APOOQ9BUR5 198 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 CAAP1Q9H8G2 361 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 MAGEE1Q9HCI5 957 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 GPR27Q9NS67 375 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 KCTD5Q9NXV2 234 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 CD84Q9UIB8 345 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 SHOC2Q9UQ13 582 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 OR1A2Q9Y585 309 aa13.95□□□□□ -0.18
USP46-209ENST00000514536 GOLGA6CA6NDK9 693 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 GOLGA6BA6NDN3 693 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 TOR1BO14657 336 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 SH3BP5O60239 455 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 METTL18O95568 372 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 AGTP01019 485 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 ATXN1LP0C7T5 689 aaKnown RBP13.94□□□□□ -0.18
USP46-209ENST00000514536 GOLGA6DP0CG33 693 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 GNG11P61952 73 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 YPEL5P62699 121 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 MTM1Q13496 603 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 PTK2BQ14289 1009 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 SUZ12Q15022 739 aaKnown RBP13.94□□□□□ -0.18
USP46-209ENST00000514536 PARP6Q2NL67 630 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 SIRPB2Q5JXA9 342 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 LYSMD3Q7Z3D4 306 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 GATAD2AQ86YP4 633 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 TAB3Q8N5C8 712 aaPredicted RBP13.94□□□□□ -0.18
USP46-209ENST00000514536 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 SETD7Q8WTS6 366 aaKnown RBP13.94□□□□□ -0.18
USP46-209ENST00000514536 FICDQ9BVA6 458 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 FSD1LQ9BXM9 530 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 ABCG8Q9H221 673 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 DNAJC28Q9NX36 388 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 GOLGA6AQ9NYA3 693 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 AAR2Q9Y312 384 aaKnown RBP13.94□□□□□ -0.18
USP46-209ENST00000514536 PCDHGB2Q9Y5G2 931 aa13.94□□□□□ -0.18
USP46-209ENST00000514536 K7ESM1 405 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 PCDHGA12O60330 932 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 IFNB1P01574 187 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 ITGAVP06756 1048 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 EIF2B5Q13144 721 aaKnown RBP13.93□□□□□ -0.18
USP46-209ENST00000514536 SPARCL1Q14515 664 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 SLC1A5Q15758 541 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 ESRP1Q6NXG1 681 aaKnown RBP13.93□□□□□ -0.18
USP46-209ENST00000514536 DBX2Q6ZNG2 339 aa13.93□□□□□ -0.18
USP46-209ENST00000514536 PRUNE1Q86TP1 453 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms