RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 NTN3O00634 580 aaPredicted RBP10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 CASC3O15234 703 aaKnown RBP10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 AKR1B10O60218 316 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 USP12O75317 370 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 MTA2O94776 668 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 MAP3K6O95382 1288 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 MPOP05164 745 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 HLA-DQB2P05538 268 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 PDHA1P08559 390 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 TPM1P09493 284 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 MX2P20592 715 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 TEAD1P28347 426 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 ACTN2P35609 894 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 ETV3P41162 512 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 ABCG1P45844 678 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 GABREP78334 506 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 IHHQ14623 411 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 PTPRRQ15256 657 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 TCEA2Q15560 299 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 IGF2-ASQ6U949 168 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 HSD11B1LQ7Z5J1 315 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 TSPAN33Q86UF1 283 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 VSIG1Q86XK7 387 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 RAPGEF5Q92565 580 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 FGF11Q92914 225 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 CCDC74AQ96AQ1 378 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 GRAMD1AQ96CP6 724 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 CHP1Q99653 195 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 TDRD1Q9BXT4 1180 aaKnown RBP10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 TEX101Q9BY14 249 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 FRMD8Q9BZ67 464 aaPredicted RBP10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 NHEJ1Q9H9Q4 299 aaPredicted RBP10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 POLR1BQ9H9Y6 1135 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 MRPL40Q9NQ50 206 aaKnown RBP10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 SPTLC3Q9NUV7 552 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 DTLQ9NZJ0 730 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 SIRPGQ9P1W8 387 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 RABGEF1Q9UJ41 708 aa10.46□□□□□ -0.73
HMGXB3-205ENST00000514469 APC2O95996 2303 aa10.46□□□□□ -0.74
HMGXB3-205ENST00000514469 MYLKQ15746 1914 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 A0A0J9YYE9 177 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 A0A1W2PNU3 283 aaPredicted RBP10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CAPN8A6NHC0 703 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 SOD1P00441 154 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 TRBC1P01850 177 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CEACAM5P06731 702 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CCNB1P14635 433 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ZNF30P17039 623 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CTPS1P17812 591 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CES1P23141 567 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 KDELR1P24390 212 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ARHGAP25P42331 645 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 LSSP48449 732 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CDK3Q00526 305 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 DSC2Q02487 901 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 DPTQ07507 201 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ITKQ08881 620 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 SLC10A2Q12908 348 aaPredicted RBP10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 TBX2Q13207 712 aaPredicted RBP10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ARHGEF7Q14155 803 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 MESDQ14696 234 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 LRRC66Q68CR7 880 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 DENND2CQ68D51 928 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 SLC9A4Q6AI14 798 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 OGFOD3Q6PK18 319 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 LRRC69Q6ZNQ3 347 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 TECPR1Q7Z6L1 1165 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 HEATR4Q86WZ0 1026 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CNGA4Q8IV77 575 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 RHOT2Q8IXI1 618 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 LSMEM2Q8N112 164 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 PLD5Q8N7P1 536 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 RNF214Q8ND24 703 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 GPR156Q8NFN8 814 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 OR6C4Q8NGE1 309 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 SLC35G2Q8TBE7 412 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ARRDC2Q8TBH0 407 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ATXN7L3BQ96GX2 97 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CRELD1Q96HD1 420 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 HIC2Q96JB3 615 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 CCDC42Q96M95 316 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ZNF578Q96N58 590 aaPredicted RBP10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 RNF157Q96PX1 679 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 TMEM168Q9H0V1 697 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ASCL3Q9NQ33 180 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 PHPT1Q9NRX4 125 aaPredicted RBP10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 HAUS2Q9NVX0 235 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 RBM22Q9NW64 420 aaKnown RBP eCLIP10.45□□□□□ -0.745e-12■■■■■ 55.7
HMGXB3-205ENST00000514469 GULP1Q9UBP9 304 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 ENTPD2Q9Y5L3 495 aa10.45□□□□□ -0.74
HMGXB3-205ENST00000514469 A0A0U1RQS6 177 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 LRRD1A4D1F6 860 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 PDE2AO00408 941 aaPredicted RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 RRP8O43159 456 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 NOBOXO60393 691 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 PRLP01236 227 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 KRT10P13645 584 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 HOXB3P14651 431 aaPredicted RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 CA4P22748 312 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 ITPKBP27987 946 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms