RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 CFAP69A5D8W1 941 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 IGLON5A6NGN9 336 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 SRRM3A6NNA2 597 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 HACD1B0YJ81 288 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 PRAMEF26H0Y7S4 382 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 KCNK1O00180 336 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 SLC31A1O15431 190 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 MTSS1O43312 755 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 HTRA2O43464 458 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 GDF9O60383 454 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 MAGEC1O60732 1142 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 SOCS5O75159 536 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ZNF189O75820 626 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 TTC4O95801 387 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 PAK4O96013 591 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 ABHD2P08910 425 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 MYZAPP0CAP1 466 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ENGP17813 658 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 NFKBIAP25963 317 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 MAT2AP31153 395 aaKnown RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 ADCY8P40145 1251 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ABL2P42684 1182 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 MAGEA6P43360 314 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 GRIA4P48058 902 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 CSNK1EP49674 416 aaKnown RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 LIMK1P53667 647 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ITGA8P53708 1063 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ATXN3P54252 364 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 PPP2CBP62714 309 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 PPP2CAP67775 309 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ZNF284Q2VY69 593 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 TMEM259Q4ZIN3 620 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 RNASEH2BQ5TBB1 312 aaKnown RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 NAPEPLDQ6IQ20 393 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ERAP2Q6P179 960 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 IL27RAQ6UWB1 636 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 C4orf22Q6V702 233 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 KDM7AQ6ZMT4 941 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 NDUFAF2Q8N183 169 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 CNTD1Q8N815 330 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 MFSD2AQ8NA29 543 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 GLIS1Q8NBF1 620 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 FAM76AQ8TAV0 307 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ARRDC2Q8TBH0 407 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 NETO1Q8TDF5 533 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 UBLCP1Q8WVY7 318 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 KLK6Q92876 244 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 TEKT5Q96M29 485 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 NSMCE3Q96MG7 304 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 LENG8Q96PV6 779 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 FERMT1Q9BQL6 677 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ROPN1BQ9BZX4 212 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 ROPN1Q9HAT0 212 aaPredicted RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 USP29Q9HBJ7 922 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 AASDHPPTQ9NRN7 309 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 ZFR2Q9UPR6 939 aaKnown RBP8.36□□□□□ -1.07
CCL28-204ENST00000514421 ZNF148Q9UQR1 794 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 RAI2Q9Y5P3 530 aa8.36□□□□□ -1.07
CCL28-204ENST00000514421 MUC22E2RYF6 1773 aaPredicted RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 USP34Q70CQ2 3546 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 A0A1B0GVT2 93 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 A0A1W2PR77 199 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 LNP1A1A4G5 178 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 GOLGA6L10A6NI86 522 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 C4orf47A7E2U8 309 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 E7ESA3 106 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 H7C0C1 242 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 TLR4O00206 839 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 CDX4O14627 284 aaPredicted RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 WNT9AO14904 365 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 VILLO15195 856 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 EIF3HO15372 352 aaKnown RBP eCLIP8.35□□□□□ -1.07
CCL28-204ENST00000514421 MMP20O60882 483 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 GJB3O75712 270 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 TM7SF2O76062 418 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 PGLSO95336 258 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 HLA-DQB2P05538 268 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 PECAM1P16284 738 aaPredicted RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 HNRNPA2B1P22626 353 aaKnown RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 CD38P28907 300 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 AKT2P31751 481 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 ATP5OP48047 213 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 C21orf59P57076 290 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 EIF3EP60228 445 aaKnown RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 DSC2Q02487 901 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 DMTNQ08495 405 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 NIPAL4Q0D2K0 466 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 OVGP1Q12889 678 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 TRAF2Q12933 501 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 SLC29A2Q14542 456 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 PRKD1Q15139 912 aaPredicted RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 RASA2Q15283 850 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 RSPO4Q2I0M5 234 aaPredicted RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 KIF19Q2TAC6 998 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 P3H1Q32P28 736 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 CEP85LQ5SZL2 805 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 ARMC12Q5T9G4 340 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 STPG1Q5TH74 334 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms