RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 A0A1W2PQC6 194 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 TMX2-CTNND1H3BSU7 103 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 EFSO43281 561 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 MAFKO60675 156 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 SOCS5O75159 536 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 HEXIM1O94992 359 aaKnown RBP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 CPP00450 1065 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 MYBL1P10243 752 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 RARAP10276 462 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 MYCLP1P12525 358 aaPredicted RBP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 KELP23276 732 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 VIPR1P32241 457 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 ARL4AP40617 200 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 MAXP61244 160 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 ZFP36L1Q07352 338 aaKnown RBP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 TRAF2Q12933 501 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 TGIF1Q15583 401 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 FILIP1LQ4L180 1135 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 BOLA3Q53S33 107 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 DENND2CQ68D51 928 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 SPECC1LQ69YQ0 1117 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 TMCO3Q6UWJ1 677 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 CCDC81Q6ZN84 652 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 TMPRSS9Q7Z410 1059 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 HSD11B1LQ7Z5J1 315 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 SPRED1Q7Z699 444 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 NRROSQ86YC3 692 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 JAMLQ86YT9 394 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 PTCD2Q8WV60 388 aaKnown RBP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 NUS1Q96E22 293 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 TMEM74Q96NL1 305 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 MGME1Q9BQP7 344 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 DPEP2Q9H4A9 486 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 SUDS3Q9H7L9 328 aaPredicted RBP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 MRPL47Q9HD33 250 aaKnown RBP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 SPATS2LQ9NUQ6 558 aaKnown RBP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.22□□□□□ -0.45
SNHG4-208ENST00000514110 LRIT1Q9P2V4 623 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 PISDQ9UG56 409 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 LOXL2Q9Y4K0 774 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 PCDHGA7Q9Y5G6 932 aa12.22□□□□□ -0.45
SNHG4-208ENST00000514110 SCN8AQ9UQD0 1980 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 A0A0U1RQS6 177 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 SMTNL1A8MU46 457 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 NUDT21O43809 227 aaKnown RBP12.21□□□□□ -0.45
SNHG4-208ENST00000514110 CEACAM5P06731 702 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 PNLIPP16233 465 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 ITIH1P19827 911 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 LHCGRP22888 699 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.45
SNHG4-208ENST00000514110 ETV5P41161 510 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 ETV3P41162 512 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 MAZP56270 477 aaKnown RBP12.21□□□□□ -0.45
SNHG4-208ENST00000514110 B4GALNT1Q00973 533 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 SRSF6Q13247 344 aaKnown RBP12.21□□□□□ -0.45
SNHG4-208ENST00000514110 ARHGEF7Q14155 803 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 HGSNATQ68CP4 663 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 TSPAN33Q86UF1 283 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 HEATR4Q86WZ0 1026 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 GPBAR1Q8TDU6 330 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 TRIM11Q96F44 468 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 DTD2Q96FN9 168 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 BTBD6Q96KE9 485 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 CCNL2Q96S94 520 aaPredicted RBP12.21□□□□□ -0.45
SNHG4-208ENST00000514110 TEX101Q9BY14 249 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 FRMD8Q9BZ67 464 aaPredicted RBP12.21□□□□□ -0.45
SNHG4-208ENST00000514110 CARS2Q9HA77 564 aaKnown RBP12.21□□□□□ -0.45
SNHG4-208ENST00000514110 PCDH18Q9HCL0 1135 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 PHPT1Q9NRX4 125 aaPredicted RBP12.21□□□□□ -0.45
SNHG4-208ENST00000514110 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 PHTF1Q9UMS5 762 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 ST14Q9Y5Y6 855 aa12.21□□□□□ -0.45
SNHG4-208ENST00000514110 A0A1W2PQ67 120 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 NPIPB15A6NHN6 443 aaPredicted RBP12.2□□□□□ -0.46
SNHG4-208ENST00000514110 PDE2AO00408 941 aaPredicted RBP12.2□□□□□ -0.46
SNHG4-208ENST00000514110 B4GAT1O43505 415 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 PGLSO95336 258 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 FGF1P05230 155 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 JMJD7P0C870 316 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 CYP2A6P11509 494 aaPredicted RBP12.2□□□□□ -0.46
SNHG4-208ENST00000514110 KRT10P13645 584 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 CCNB1P14635 433 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 AK4P27144 223 aaPredicted RBP12.2□□□□□ -0.46
SNHG4-208ENST00000514110 MMP13P45452 471 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 POLD2P49005 469 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 ZNF165P49910 485 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 OR1D5P58170 312 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 CDK3Q00526 305 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 SLC25A11Q02978 314 aaKnown RBP12.2□□□□□ -0.46
SNHG4-208ENST00000514110 PIGHQ14442 188 aaPredicted RBP12.2□□□□□ -0.46
SNHG4-208ENST00000514110 NR1I3Q14994 352 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
SNHG4-208ENST00000514110 RFLNAQ6ZTI6 216 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 Q6ZVL8 140 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 C17orf82Q86X59 251 aaPredicted RBP12.2□□□□□ -0.46
SNHG4-208ENST00000514110 SLITRK4Q8IW52 837 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 ATPAF2Q8N5M1 289 aa12.2□□□□□ -0.46
SNHG4-208ENST00000514110 SMIM14Q96QK8 99 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms