RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TM7SF2O76062 418 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 RECQL5O94762 991 aaPredicted RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 TMEM63AO94886 807 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 AP2A1O95782 977 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 WNT1P04628 370 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 CFIP05156 583 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 GOLGA6DP0CG33 693 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 TPH1P17752 444 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 HLA-DPA1P20036 260 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 CD27P26842 260 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 FDFT1P37268 417 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 TNNT3P45378 269 aaPredicted RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 CCR5P51681 352 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 RPL26P61254 145 aaKnown RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 DR1Q01658 176 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 SPEM2Q0P670 501 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 SEMA5AQ13591 1074 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 ARHGEF7Q14155 803 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 PTPRCAPQ14761 206 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 IRF4Q15306 451 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 CDKN3Q16667 212 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 SETMARQ53H47 684 aaPredicted RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 WDR45BQ5MNZ6 344 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 ALS2CLQ60I27 953 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 DENND5AQ6IQ26 1287 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 GCNT7Q6ZNI0 430 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 Q6ZVL8 140 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 JAMLQ86YT9 394 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 TP53I13Q8NBR0 393 aaPredicted RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 KIF18AQ8NI77 898 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 EID2BQ96D98 161 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 SLC17A9Q9BYT1 436 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 TRIM31Q9BZY9 425 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 SEMA4AQ9H3S1 761 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 LRRC40Q9H9A6 602 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 BPIFA1Q9NP55 256 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 PARD6AQ9NPB6 346 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 MBNL1Q9NR56 388 aaKnown RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 GOLGA6AQ9NYA3 693 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 ASIC3Q9UHC3 531 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 GMEB2Q9UKD1 530 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 PILRBQ9UKJ0 227 aa9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 RPL26L1Q9UNX3 145 aaKnown RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 AAR2Q9Y312 384 aaKnown RBP9.81□□□□□ -0.84
TOPBP1-209ENST00000513818 A0A1B0GVT2 93 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 GOLGA8MH3BSY2 632 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 CCDC188H7C350 402 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 CCL22O00626 93 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 GPR39O43194 453 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 RAD51CO43502 376 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 GAS8O95995 478 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 FGF1P05230 155 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 HNRNPA2B1P22626 353 aaKnown RBP9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 SUOXP51687 545 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 STC1P52823 247 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 CKAP4Q07065 602 aaKnown RBP9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 SGCGQ13326 291 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 PTK6Q13882 451 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 SEPT6Q14141 434 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 POU6F1Q14863 301 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 SF3A2Q15428 464 aaKnown RBP9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 WHAMMP3Q1A5X7 153 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 WSCD2Q2TBF2 565 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 TPRG1LQ5T0D9 272 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 NAPEPLDQ6IQ20 393 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 CCDC70Q6NSX1 233 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 NEK5Q6P3R8 708 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 RANBP10Q6VN20 620 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 PPP1R21Q6ZMI0 780 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 ZNF534Q76KX8 674 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 GLT6D1Q7Z4J2 308 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 PTAR1Q7Z6K3 402 aaPredicted RBP9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 NDUFAF2Q8N183 169 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 TTC30BQ8N4P2 665 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 PLA2G15Q8NCC3 412 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 LRRN4CLQ8ND94 238 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 OR2I1PQ8NGU4 316 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 C1orf216Q8TAB5 229 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 GRK7Q8WTQ7 553 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 DNASE2BQ8WZ79 361 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 CPT1BQ92523 772 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 NUS1Q96E22 293 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 DTD2Q96FN9 168 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 COQ10AQ96MF6 247 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 AGAP2Q99490 1192 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 KLF6Q99612 283 aaPredicted RBP9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 C1QTNF2Q9BXJ5 285 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 GPR63Q9BZJ6 419 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 PCED1AQ9H1Q7 454 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 RNF14Q9UBS8 474 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 PPIL1Q9Y3C6 166 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 KCTD3Q9Y597 815 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 ARL5AQ9Y689 179 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 PCDH15Q96QU1 1955 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 GON4LQ3T8J9 2241 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 TMEM131Q92545 1883 aa9.8□□□□□ -0.84
TOPBP1-209ENST00000513818 RALGAPA1Q6GYQ0 2036 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 POM121BA6NF01 834 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 ESPNB1AK53 854 aa9.79□□□□□ -0.84
TOPBP1-209ENST00000513818 BCAT2O15382 392 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms