RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 EXD1Q8NHP7 514 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 FNIP1Q8TF40 1166 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 MAGOHBQ96A72 148 aaKnown RBP9.94□□□□□ -0.82
CCL28-203ENST00000513525 THAP11Q96EK4 314 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 HMCESQ96FZ2 354 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 KLHL32Q96NJ5 620 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 KLF6Q99612 283 aaPredicted RBP9.94□□□□□ -0.82
CCL28-203ENST00000513525 ERP44Q9BS26 406 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 CALN1Q9BXU9 219 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 CPEB1Q9BZB8 566 aaKnown RBP9.94□□□□□ -0.82
CCL28-203ENST00000513525 TRIM7Q9C029 511 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 KLC2Q9H0B6 622 aa9.94□□□□□ -0.82
CCL28-203ENST00000513525 CACNA1GO43497 2377 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 SPTY2D1-AS1A0A0U1RR47 76 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 ESYT3A0FGR9 886 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 FAM149AA5PLN7 773 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 POM121BA6NF01 834 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 RAD51BO15315 384 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 SIGLEC6O43699 453 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 UGT2B4P06133 528 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 GIMD1P0DJR0 217 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 RARAP10276 462 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 ECHS1P30084 290 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 COILP38432 576 aaPredicted RBP9.93□□□□□ -0.82
CCL28-203ENST00000513525 PTGIRP43119 386 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 NDST2P52849 883 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 TPI1P60174 286 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 RHOAP61586 193 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 HNRNPKP61978 463 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCL28-203ENST00000513525 HLTFQ14527 1009 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCL28-203ENST00000513525 SIX1Q15475 284 aaPredicted RBP9.93□□□□□ -0.82
CCL28-203ENST00000513525 ATXN7L2Q5T6C5 722 aaPredicted RBP9.93□□□□□ -0.82
CCL28-203ENST00000513525 GDPD4Q6W3E5 623 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 LEKR1Q6ZMV7 388 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 Q6ZSR6 202 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 PTAR1Q7Z6K3 402 aaPredicted RBP9.93□□□□□ -0.82
CCL28-203ENST00000513525 ZNF354CQ86Y25 554 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 MARCH9Q86YJ5 346 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 CPNE8Q86YQ8 564 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 RCOR2Q8IZ40 523 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 RBM41Q96IZ5 413 aaKnown RBP9.93□□□□□ -0.82
CCL28-203ENST00000513525 PDFQ9HBH1 243 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 DKK3Q9UBP4 350 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 FEZ2Q9UHY8 353 aaPredicted RBP9.93□□□□□ -0.82
CCL28-203ENST00000513525 GGT7Q9UJ14 662 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 AP4E1Q9UPM8 1137 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 GPSM3Q9Y4H4 160 aa9.93□□□□□ -0.82
CCL28-203ENST00000513525 TSPAN11A1L157 253 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 IGLON5A6NGN9 336 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 TRIM38O00635 465 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 FPGTO14772 594 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 DAPK3O43293 454 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 ALPPL2P10696 532 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 JUPP14923 745 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 NME1P15531 152 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 PSMA2P25787 234 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 PTPN7P35236 360 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 SUOXP51687 545 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 ZNF135P52742 658 aaPredicted RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 PFN3P60673 137 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 SGCGQ13326 291 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 FZD2Q14332 565 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 GRM3Q14832 879 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 ACAP1Q15027 740 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 TERF2Q15554 542 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 CFAP58Q5T655 872 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 ERMARDQ5T6L9 678 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 LCE2CQ5TA81 110 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 HES3Q5TGS1 186 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 AADACL2Q6P093 401 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 LRIG3Q6UXM1 1119 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 POLNQ7Z5Q5 900 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 PARGQ86W56 976 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 PSTKQ8IV42 348 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 ARFGAP1Q8N6T3 406 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 FAM181AQ8N9Y4 354 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 HCAR2Q8TDS4 363 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 RUFY1Q96T51 708 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 SH3GL2Q99962 352 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 SNRNP25Q9BV90 132 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 REPIN1Q9BWE0 567 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 UCKL1Q9NWZ5 548 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 DDX56Q9NY93 547 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 NLGN3Q9NZ94 848 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 LHX3Q9UBR4 397 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 ITM2BQ9Y287 266 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 SCN8AQ9UQD0 1980 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 LOC400499M0QZD8 3231 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 LOC100996750A0A140TA64 210 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 NEMP2A6NFY4 417 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 GOLGA8KD6RF30 607 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 H3BM21 787 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 AGPSO00116 658 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 EEF2KO00418 725 aaKnown RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 NEMP1O14524 444 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 TOR1BO14657 336 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 SCAMP1O15126 338 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 POLR3GO15318 223 aaPredicted RBP9.92□□□□□ -0.82
CCL28-203ENST00000513525 PRAMEF11O60813 436 aa9.92□□□□□ -0.82
CCL28-203ENST00000513525 TM7SF2O76062 418 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms