RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RIMKLBQ9ULI2 386 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 CHMP2BQ9UQN3 213 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 ITM2BQ9Y287 266 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 ARL5AQ9Y689 179 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 MAD1L1Q9Y6D9 718 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 ZNF106Q9H2Y7 1883 aaKnown RBP12.54□□□□□ -0.4
PDPN-210ENST00000513143 PLXND1Q9Y4D7 1925 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 ZDBF2Q9HCK1 2354 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 EML5Q05BV3 1969 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 DOCK9Q9BZ29 2069 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 UQCRHLA0A096LP55 91 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 TSPAN6O43657 245 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 PLRG1O43660 514 aaKnown RBP12.54□□□□□ -0.4
PDPN-210ENST00000513143 USP1O94782 785 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 CLDN7O95471 211 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 UQCRHP07919 91 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 PGAM1P18669 254 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 LPOP22079 712 aaPredicted RBP12.54□□□□□ -0.4
PDPN-210ENST00000513143 HOXA6P31267 233 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 ZNF140P52738 457 aaPredicted RBP12.54□□□□□ -0.4
PDPN-210ENST00000513143 STC1P52823 247 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 ARHGEF7Q14155 803 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 CNGA3Q16281 694 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 MAP9Q49MG5 647 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 ANKRD20A4Q4UJ75 823 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 TSTD2Q5T7W7 516 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 LIPIQ6XZB0 460 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 CAVIN3Q969G5 261 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 C9orf72Q96LT7 481 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 ZNF778Q96MU6 729 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 EPHX3Q9H6B9 360 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 PLAC1Q9HBJ0 212 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 CD93Q9NPY3 652 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 PRMT8Q9NR22 394 aaPredicted RBP12.54□□□□□ -0.4
PDPN-210ENST00000513143 TREX1Q9NSU2 369 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 SPATA6Q9NWH7 488 aaPredicted RBP12.54□□□□□ -0.4
PDPN-210ENST00000513143 IL17CQ9P0M4 197 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 ZC3H7BQ9UGR2 993 aaKnown RBP12.54□□□□□ -0.4
PDPN-210ENST00000513143 GGT7Q9UJ14 662 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 KCTD3Q9Y597 815 aa12.54□□□□□ -0.4
PDPN-210ENST00000513143 TNFRSF10AO00220 468 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 PSMD11O00231 422 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 NEMP1O14524 444 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 ZNF217O75362 1048 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 ERLIN1O75477 346 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 TTC4O95801 387 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 POLBP06746 335 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 GSTA2P09210 222 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 C1SP09871 688 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 TSHRP16473 764 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 NMBRP28336 390 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 OXTRP30559 389 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 LIG3P49916 1009 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 PMS2P54278 862 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 ADPRHP54922 357 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 ACVR1Q04771 509 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 SKIDA1Q1XH10 827 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 STEAP4Q687X5 459 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 ESRP1Q6NXG1 681 aaKnown RBP12.53□□□□□ -0.4
PDPN-210ENST00000513143 UNC5AQ6ZN44 842 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 TRMT10CQ7L0Y3 403 aaKnown RBP12.53□□□□□ -0.4
PDPN-210ENST00000513143 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 RAVER1Q8IY67 606 aaKnown RBP12.53□□□□□ -0.4
PDPN-210ENST00000513143 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 TMEM105Q8N8V8 129 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 OR13C4Q8NGS5 318 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 OR13J1Q8NGT2 312 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 OR14C36Q8NHC7 312 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
PDPN-210ENST00000513143 MFSD3Q96ES6 412 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 TRIM56Q9BRZ2 755 aaKnown RBP12.53□□□□□ -0.4
PDPN-210ENST00000513143 BTBD1Q9H0C5 482 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 CDC42EP4Q9H3Q1 356 aaKnown RBP12.53□□□□□ -0.4
PDPN-210ENST00000513143 SEMA4AQ9H3S1 761 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 SGK2Q9HBY8 427 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 LRRC4CQ9HCJ2 640 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 PREBQ9HCU5 417 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 NLE1Q9NVX2 485 aaPredicted RBP12.53□□□□□ -0.4
PDPN-210ENST00000513143 NINJ2Q9NZG7 142 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 PKP3Q9Y446 797 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 RPS6KL1Q9Y6S9 549 aa12.53□□□□□ -0.4
PDPN-210ENST00000513143 CCDC163A0A0D9SF12 145 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 ZCWPW2A0A1B0GU75 182 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 CCDC78A2IDD5 438 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
PDPN-210ENST00000513143 BUD23O43709 281 aaKnown RBP12.52□□□□□ -0.41
PDPN-210ENST00000513143 ELFN1P0C7U0 828 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 HADHAP40939 763 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 SPINT3P49223 89 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 GPX6P59796 221 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 CREB5Q02930 508 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 FRG1Q14331 258 aaKnown RBP12.52□□□□□ -0.41
PDPN-210ENST00000513143 PTPRCAPQ14761 206 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 CRYMQ14894 314 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 KYNUQ16719 465 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 SPANXN3Q5MJ09 141 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 NEK5Q6P3R8 708 aa12.52□□□□□ -0.41
PDPN-210ENST00000513143 CES3Q6UWW8 571 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms