RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 C18orf25Q96B23 403 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 THOC1Q96FV9 657 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 HSFY1Q96LI6 401 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 C3orf30Q96M34 536 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DEPDC7Q96QD5 511 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MBOAT4Q96T53 435 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRMT1Q99873 361 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ELAC2Q9BQ52 826 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 C16orf70Q9BSU1 422 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 HGH1Q9BTY7 390 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 HTATIP2Q9BUP3 242 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SEMA4CQ9C0C4 833 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PAIP1Q9H074 479 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 AP5M1Q9H0R1 490 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 C2orf40Q9H1Z8 148 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADNPQ9H2P0 1102 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARMT1Q9H993 441 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 EPB41L5Q9HCM4 733 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZFATQ9P243 1243 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF219Q9P2Y4 722 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RPL26L1Q9UNX3 145 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC12A7Q9Y666 1083 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DOCK11Q5JSL3 2073 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 A0A087WUV0 522 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANTXRLA6NF34 631 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CAPN8A6NHC0 703 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM110-MUSTN1A8MSY1 372 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 C1QTNF9BB2RNN3 333 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC30A4O14863 429 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ITM2AO43736 263 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF189O75820 626 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC25A27O95847 323 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZBED1O96006 694 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACADMP11310 421 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PECAM1P16284 738 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MSR1P21757 451 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 GRK2P25098 689 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MST1P26927 711 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DCKP27707 260 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RGS2P41220 211 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MSH2P43246 934 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 KCNQ4P56696 695 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 BCAR1P56945 870 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CABP4P57796 275 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ST8SIA6P61647 398 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SEMG2Q02383 582 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT17Q04695 432 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ORC1Q13415 861 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PDE1CQ14123 709 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGEF7Q14155 803 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ITIH4Q14624 930 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 VEPH1Q14D04 833 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PTPRNQ16849 979 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 AOC3Q16853 763 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 KIZQ2M2Z5 673 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SUPT20HL1Q3ZLR7 823 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANKRD20A4Q4UJ75 823 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 SGO2Q562F6 1265 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAXCQ5TGI0 409 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 NEK5Q6P3R8 708 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 GALNT18Q6P9A2 607 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RINLQ6ZS11 566 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCDC80Q76M96 950 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC8DQ7L1W4 858 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 DPP9Q86TI2 863 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 C17orf82Q86X59 251 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 WDFY1Q8IWB7 410 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MPP5Q8N3R9 675 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RYBPQ8N488 228 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF366Q8N895 744 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCDC54Q8NEL0 328 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CSGALNACT1Q8TDX6 532 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TOP1MTQ969P6 601 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 NAF1Q96HR8 494 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 CNDP2Q96KP4 475 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM68Q96MH6 324 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 NUDCD1Q96RS6 583 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 S100A13Q99584 98 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RBBP8Q99708 897 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ERP44Q9BS26 406 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 FTHL17Q9BXU8 183 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCED1AQ9H1Q7 454 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 EXOSC3Q9NQT5 275 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ETNK2Q9NVF9 386 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 THG1LQ9NWX6 298 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 LIMD1Q9UGP4 676 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARMCX3Q9UH62 379 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 RSL24D1Q9UHA3 163 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 VPS51Q9UID3 782 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 AMFRQ9UKV5 643 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 STX8Q9UNK0 236 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 NIP7Q9Y221 180 aaKnown RBP eCLIP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAFBQ9Y5Q3 323 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 NUMA1Q14980 2115 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 MINDY4BA8MYZ0 360 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 KCNJ18B7U540 433 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 H3BMH7 237 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 WWP2O00308 870 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 IDH3BO43837 385 aa1.66□□□□□ -2.14
TRAPPC13-211ENST00000512009 PEX14O75381 377 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms