RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 NSUN2Q08J23 767 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 GRB10Q13322 594 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PDK4Q16654 411 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF697Q5TEC3 545 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 BAIAP2L2Q6UXY1 529 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF440Q8IYI8 595 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 OTULINQ96BN8 352 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MTERF3Q96E29 417 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CLK4Q9HAZ1 481 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CASS4Q9NQ75 786 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 NOP16Q9Y3C1 178 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZBBXA8MT70 800 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 KIAA0355O15063 1070 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SLC7A4O43246 635 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 KRT36O76013 467 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 NDST3O95803 873 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MYCP01106 439 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 LGALS2P05162 132 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CAPGP40121 348 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MTHFRP42898 656 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 DYNLT1P63172 113 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 STK4Q13043 487 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PKP1Q13835 747 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CNKSR3Q6P9H4 555 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 FBXL19Q6PCT2 694 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SPOCD1Q6ZMY3 1216 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PHOSPHO2Q8TCD6 241 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 AHCYL2Q96HN2 611 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 NSMCE2Q96MF7 247 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 LPIN3Q9BQK8 851 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CORO1BQ9BR76 489 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MYLK2Q9H1R3 596 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 USP29Q9HBJ7 922 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 AGPAT5Q9NUQ2 364 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SPASTQ9UBP0 616 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF780BQ9Y6R6 833 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF407Q9C0G0 2248 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 UBDO15205 165 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 COQ9O75208 318 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 NDUFS2O75306 463 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SCAF4O95104 1147 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 NFICP08651 508 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CPA3P15088 417 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 DPEP1P16444 411 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZNF12P17014 697 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ME2P23368 584 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 CRHR1P34998 444 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TUBA4AP68366 448 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TAF5Q15542 800 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 XKR4Q5GH76 650 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 LRIF1Q5T3J3 769 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 EMC10Q5UCC4 262 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 YOD1Q5VVQ6 348 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 GPR141Q7Z602 305 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 KBTBD6Q86V97 674 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 DGCR14Q96DF8 476 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 NSMCE3Q96MG7 304 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SEPT5Q99719 369 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 C17orf80Q9BSJ5 609 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MLPHQ9BV36 600 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 GBA3Q9H227 469 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PRDM5Q9NQX1 630 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 GDF3Q9NR23 364 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 UPB1Q9UBR1 384 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TMEM5Q9Y2B1 443 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ATP11BQ9Y2G3 1177 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 INPP5FQ9Y2H2 1132 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TLL2Q9Y6L7 1015 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PLXNB3Q9ULL4 1909 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TSPAN3O60637 253 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SLITRK3O94933 977 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TOP3BO95985 862 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 GLUD1P00367 558 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 LBPP18428 481 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 GLUD2P49448 558 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ACADVLP49748 655 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PDX1P52945 283 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ITGA8P53708 1063 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SRSF11Q05519 484 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 FCHO2Q0JRZ9 810 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 DCTN2Q13561 401 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 DEFB115Q30KQ5 88 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZRANB3Q5FWF4 1079 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ZC3H14Q6PJT7 736 aaKnown RBP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 SCARA5Q6ZMJ2 495 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TMC7Q7Z402 723 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 LRRC71Q8N4P6 559 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 ALLCQ8N6M5 410 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 METTL25Q8N6Q8 603 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 TMEM145Q8NBT3 493 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 THAP11Q96EK4 314 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 QKIQ96PU8 341 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTPN13-209ENST00000511467 MIPEPQ99797 713 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 LGALS13Q9UHV8 139 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PHTF1Q9UMS5 762 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 DMTF1Q9Y222 760 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 PCNX1Q96RV3 2341 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 METTL21EPA6NDL7 271 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 FAM86C2PA6NEL3 165 aa4.95□□□□□ -1.62
PTPN13-209ENST00000511467 GATBO75879 557 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms