RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 RETSATQ6NUM9 610 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 TRIM65Q6PJ69 517 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 LRRC31Q6UY01 552 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 PARS2Q7L3T8 475 aaKnown RBP8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 BNIPLQ7Z465 357 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 ARL14Q8N4G2 192 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 PCDH20Q8N6Y1 951 aaKnown RBP8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 C1orf131Q8NDD1 294 aaKnown RBP8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 DENND6BQ8NEG7 585 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 OR7D4Q8NG98 312 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 WDR36Q8NI36 951 aaKnown RBP8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 BTN2A2Q8WVV5 523 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 RAB7BQ96AH8 199 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 HAPLN3Q96S86 360 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 IL12RB2Q99665 862 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 CRACR2AQ9BSW2 395 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 RSRP1Q9BUV0 290 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 MPP6Q9NZW5 540 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 APEX2Q9UBZ4 518 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 IPO11Q9UI26 975 aaKnown RBP8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 SNX10Q9Y5X0 201 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 LRRK1Q38SD2 2015 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 DOPEY2Q9Y3R5 2298 aa8.73□□□□□ -1.01
COL4A3BP-206ENST00000508809 CCDC187A0A096LP49 1063 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 GTPBP10A4D1E9 387 aaKnown RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PMS2P1A4D2B8 440 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 GOLGA6L4A6NEF3 574 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 C16orf96A6NNT2 1141 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 TOR1BO14657 336 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 AREL1O15033 823 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 CASC3O15234 703 aaKnown RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 ENDOD1O94919 500 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 TNFSF15O95150 251 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 ITGA2BP08514 1039 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 ITIH2P19823 946 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PON1P27169 355 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 CDH5P33151 784 aaPredicted RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 USP8P40818 1118 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 CCNHP51946 323 aaPredicted RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 YPEL5P62699 121 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PTK2BQ14289 1009 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 SLC25A52Q3SY17 297 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 ZNF805Q5CZA5 627 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 KIAA1614Q5VZ46 1190 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 GBP6Q6ZN66 633 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 CCDC81Q6ZN84 652 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 TFAP2DQ7Z6R9 452 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PASD1Q8IV76 773 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 SLC35F3Q8IY50 421 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PLD6Q8N2A8 252 aaKnown RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 EXD3Q8N9H8 876 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 LMX1AQ8TE12 382 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 NAT6Q93015 286 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 LIN37Q96GY3 246 aaPredicted RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 HRASLS5Q96KN8 279 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 TMEM74Q96NL1 305 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 CCNL2Q96S94 520 aaPredicted RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 MIPEPQ99797 713 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 SPON2Q9BUD6 331 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 CLPBQ9H078 707 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 TCEAL2Q9H3H9 227 aaPredicted RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 RETREG1Q9H6L5 497 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 HECAQ9UBI9 543 aaPredicted RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PPARGC1AQ9UBK2 798 aaKnown RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 SPASTQ9UBP0 616 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 ACSL6Q9UKU0 697 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PNMA8BQ9ULN7 279 aaPredicted RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 STAP1Q9ULZ2 295 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PAXBP1Q9Y5B6 917 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 PCDHGA7Q9Y5G6 932 aa8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 UBR5O95071 2799 aaPredicted RBP8.72□□□□□ -1.01
COL4A3BP-206ENST00000508809 FOXN3O00409 490 aaPredicted RBP8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 MUSKO15146 869 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 YY2O15391 372 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 NOBOXO60393 691 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 SRGAP2O75044 1071 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 FGFR1OPO95684 399 aaKnown RBP8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 KRT9P35527 623 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 SULT1E1P49888 294 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 CSRP3P50461 194 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 ADKP55263 362 aaKnown RBP8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 STX17P56962 302 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 RNASE9P60153 205 aaKnown RBP8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 APBA1Q02410 837 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 GNA12Q03113 381 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 DEUP1Q05D60 604 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 PAK1Q13153 545 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 EXOC3L4Q17RC7 722 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 LINC00303Q3SY05 128 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 SNAP47Q5SQN1 464 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 DPY19L2P1Q6NXN4 242 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 LVRNQ6Q4G3 990 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 CRTC1Q6UUV9 634 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 ARCQ7LC44 396 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 UBE3DQ7Z6J8 389 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 SLC47A2Q86VL8 602 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 RBFAQ8N0V3 343 aa8.71□□□□□ -1.02
COL4A3BP-206ENST00000508809 SDR16C5Q8N3Y7 309 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms