RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ZNF267Q14586 743 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 TNIP1Q15025 636 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 TRMT5Q32P41 509 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 MGAT5BQ3V5L5 792 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ATAT1Q5SQI0 421 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 BEND3Q5T5X7 828 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ZNF658Q5TYW1 1059 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 IL23RQ5VWK5 629 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 DLK2Q6UY11 383 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ZNF517Q6ZMY9 492 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 MIER3Q7Z3K6 550 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 LRRC34Q8IZ02 419 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 RIBC1Q8N443 379 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 SLC15A4Q8N697 577 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CSGALNACT2Q8N6G5 542 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 NRACQ8N912 160 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 USP38Q8NB14 1042 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 MINDY2Q8NBR6 621 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CATSPER1Q8NEC5 780 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 DDHD1Q8NEL9 900 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ABTB1Q969K4 478 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 MCUR1Q96AQ8 359 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 EME1Q96AY2 570 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 MAGEB18Q96M61 343 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CFAP57Q96MR6 1250 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 SERPINB12Q96P63 405 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 BTBD9Q96Q07 612 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ERGIC2Q96RQ1 377 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 FMO2Q99518 471 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 SELENOSQ9BQE4 189 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CCDC77Q9BR77 488 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 RIOK1Q9BRS2 568 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 EFHD1Q9BUP0 239 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 DDX23Q9BUQ8 820 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 NUF2Q9BZD4 464 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 NACAP1Q9BZK3 213 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 USP44Q9H0E7 712 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 FOXP1Q9H334 677 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CD209Q9NNX6 404 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 UBN1Q9NPG3 1134 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 TRMT13Q9NUP7 481 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ATAD3AQ9NVI7 634 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 RNF186Q9NXI6 227 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 UBAP1Q9NZ09 502 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 SENP1Q9P0U3 644 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 TSPYL4Q9UJ04 414 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 PRELID1Q9Y255 219 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ITM2BQ9Y287 266 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 SQORQ9Y6N5 450 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 LTN1O94822 1766 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 IQANK1A0A1B0GTG1 560 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 A0A1B0GVG6 124 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 TTC26A0AVF1 554 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 E9PMD0 336 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 ZNF701M0R085 212 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 PODXLO00592 558 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 SOCS2O14508 198 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 ADAM10O14672 748 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 RASGRF2O14827 1237 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 DSCR3O14972 297 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 POLR2DO15514 142 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 RNMTO43148 476 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 RANBP6O60518 1105 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 CTDNEP1O95476 244 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 AFPP02771 609 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 CRABP2P29373 138 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 MAGEA1P43355 309 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 PSG6Q00889 435 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 TBL3Q12788 808 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 IKQ13123 557 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 HNRNPDQ14103 355 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 FGL2Q14314 439 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 ARHGEF6Q15052 776 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 RPS6KA1Q15418 735 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 FAM187BQ17R55 369 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT24Q2M2I5 525 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 SLC9C1Q4G0N8 1177 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 SLC45A4Q5BKX6 768 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 IFIT1BQ5T764 474 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 AAGABQ6PD74 315 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 DHRS4L2Q6PKH6 230 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 C4orf50Q6ZRC1 276 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 RGS9BPQ6ZS82 235 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 NEK10Q6ZWH5 1172 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 TRMT10CQ7L0Y3 403 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 AACSQ86V21 672 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 TMEM126BQ8IUX1 230 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 SPICE1Q8N0Z3 855 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 LSMEM2Q8N112 164 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 CCDC89Q8N998 374 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 PYROXD1Q8WU10 500 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 CKAP2Q8WWK9 683 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 C1GALT1C1Q96EU7 318 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 EPSTI1Q96J88 318 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 MPP4Q96JB8 637 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT12Q99456 494 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 MRPS26Q9BYN8 205 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 GLIS2Q9BZE0 524 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 ZMYND12Q9H0C1 365 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 CUEDC2Q9H467 287 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms