RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 PAX3P23760 479 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 CHATP28329 748 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 STX2P32856 288 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 METAP2P50579 478 aaKnown RBP eCLIP3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 CCR9P51686 369 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 CLCN3P51790 818 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 ERVFC1-1P60608 527 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 MPP1Q00013 466 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 SLC20A2Q08357 652 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 NEDD9Q14511 834 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 OASLQ15646 514 aaKnown RBP3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 KIF19Q2TAC6 998 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 CXorf66Q5JRM2 361 aaPredicted RBP3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 INO80CQ6PI98 192 aaPredicted RBP3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 KLHL24Q6TFL4 600 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 ATF7IPQ6VMQ6 1270 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 C18orf65Q6ZTR6 163 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 ZNF771Q7L3S4 317 aaPredicted RBP3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 NR2C2APQ86WQ0 139 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 CHERPQ8IWX8 916 aaKnown RBP3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 TSPYL6Q8N831 410 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 PCYOX1LQ8NBM8 494 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 SCCPDHQ8NBX0 429 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 NEK9Q8TD19 979 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 GTF3C6Q969F1 213 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 GRAMD2BQ96HH9 432 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 SLC41A2Q96JW4 573 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 FAM84BQ96KN1 310 aaPredicted RBP3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 PPM1MQ96MI6 270 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 CMKLR1Q99788 373 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 H2AFJQ9BTM1 129 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 HINT3Q9NQE9 182 aaKnown RBP3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 NFS1Q9Y697 457 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 PIAS3Q9Y6X2 628 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 SCN5AQ14524 2016 aa3.46□□□□□ -1.86
CDC42SE2-210ENST00000506929 A0A087WYN8 130 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 FAM237AA0A1B0GTK4 181 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 PRAC2D3DTV9 90 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 ACOT8O14734 319 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 MTA2O94776 668 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 NKX2-2O95096 273 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 KCNK5O95279 499 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 MAOAP21397 527 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 ILF3Q12906 894 aaKnown RBP eCLIP3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 ZBTB17Q13105 803 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 SNTA1Q13424 505 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 FRG1Q14331 258 aaKnown RBP3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 EFHC1Q5JVL4 640 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 NAA35Q5VZE5 725 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 CDC73Q6P1J9 531 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 TSSK4Q6SA08 328 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 CYP20A1Q6UW02 462 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 CLEC17AQ6ZS10 378 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 KBTBD3Q8NAB2 608 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 OR14L1PQ8NHC6 308 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 SLC20A1Q8WUM9 679 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 SORCS1Q8WY21 1168 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 TANKQ92844 425 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 IGSF8Q969P0 613 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 MMABQ96EY8 250 aaPredicted RBP3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 FAM110AQ9BQ89 295 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 KXD1Q9BQD3 176 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 RETREG1Q9H6L5 497 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 ZNF112Q9UJU3 913 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 PADI3Q9ULW8 664 aa3.45□□□□□ -1.86
CDC42SE2-210ENST00000506929 SAA2-SAA4A0A096LPE2 208 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 C1orf226A1L170 272 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 LRRC53A6NM62 1247 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 HNRNPCL2B2RXH8 293 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 USP17L23D6RBM5 183 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 RTN3O95197 1032 aaPredicted RBP3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 MLYCDO95822 493 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 SPARCP09486 303 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 IRF1P10914 325 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 HLA-DOBP13765 273 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 TNFAIP3P21580 790 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 MAPK4P31152 587 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 CDAP32320 146 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 F2RL1P55085 397 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 NLRP5P59047 1200 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 TRAF2Q12933 501 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 TBX2Q13207 712 aaPredicted RBP3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 MED22Q15528 200 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 GSTA3Q16772 222 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 CDONQ4KMG0 1287 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 SPSB3Q6PJ21 355 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 RAD9BQ6WBX8 426 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 PQLC2Q6ZP29 291 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 TAOK1Q7L7X3 1001 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 WDR63Q8IWG1 891 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 DIS3L2Q8IYB7 885 aaKnown RBP3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 DSELQ8IZU8 1212 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 CIARTQ8N365 385 aaPredicted RBP3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 NAXEQ8NCW5 288 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 BBS10Q8TAM1 723 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 RFFLQ8WZ73 363 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 INTS12Q96CB8 462 aaKnown RBP3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 SAAL1Q96ER3 474 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 POLR3GLQ9BT43 218 aa3.44□□□□□ -1.86
CDC42SE2-210ENST00000506929 CHMP4AQ9BY43 222 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms