RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 K7ESM1 405 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 ZSCAN12O43309 604 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 KCNK5O95279 499 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 STC1P52823 247 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 GDF10P55107 478 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 WNT3AP56704 352 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 PTSQ03393 145 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 BNIP3Q12983 259 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 INPP5AQ14642 412 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 SIX1Q15475 284 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 ZNF542PQ5EBM4 170 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 ANKRD20A2Q5SQ80 823 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 ANKRD20A1Q5TYW2 823 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 ANKRD20A3Q5VUR7 823 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 NYAP1Q6ZVC0 841 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 Q6ZVL8 140 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 KANSL1Q7Z3B3 1105 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 TECPR1Q7Z6L1 1165 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 DCP2Q8IU60 420 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 NDUFAF2Q8N183 169 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 CCDC110Q8TBZ0 833 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 SAP25Q8TEE9 199 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 NUS1Q96E22 293 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 MRGPRX2Q96LB1 330 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 SPATA13Q96N96 652 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 MLPHQ9BV36 600 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 ADGRE3Q9BY15 652 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 KLF15Q9UIH9 416 aa18.25■□□□□ 0.51
PDLIM7-216ENST00000506537 SPTBN2O15020 2390 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 ENC1O14682 589 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 SDC3O75056 442 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 CBFA2T3O75081 653 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 CLDN7O95471 211 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 NDST3O95803 873 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 ATXN1LP0C7T5 689 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 PIRTP0C851 137 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 ZNF30P17039 623 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 PSMB4P28070 264 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 CXCR5P32302 372 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 ARRB1P49407 418 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 NOVA1P51513 510 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 YPEL5P62699 121 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 EIF2B5Q13144 721 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 MTM1Q13496 603 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 PPM1JQ5JR12 505 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 PSAPL1Q6NUJ1 521 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 ESRP1Q6NXG1 681 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 FAM71DQ8N9W8 422 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 BAHD1Q8TBE0 780 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 IFT43Q96FT9 208 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 TMEM121Q9BTD3 319 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 PCOLCE2Q9UKZ9 415 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 OR1A2Q9Y585 309 aa18.24■□□□□ 0.51
PDLIM7-216ENST00000506537 LRP4O75096 1905 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 C1orf232A0A0U1RR37 186 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 LOC285095A0A1B0GVY8 99 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 C5orf60A6NFR6 353 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 TOR1BO14657 336 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 YKT6O15498 198 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 FLRT2O43155 660 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 LIASO43766 372 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 CHRNA4P43681 627 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 OASLQ15646 514 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 ITPRIPL1Q6GPH6 555 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 MACC1Q6ZN28 852 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 LYSMD3Q7Z3D4 306 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 PARGQ86W56 976 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 SLC35F6Q8N357 371 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 IPMKQ8NFU5 416 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 C1orf54Q8WWF1 131 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 FUBP1Q96AE4 644 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 EID2BQ96D98 161 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 APOOQ9BUR5 198 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 DNAJC28Q9NX36 388 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 CD84Q9UIB8 345 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 SPO11Q9Y5K1 396 aa18.23■□□□□ 0.51
PDLIM7-216ENST00000506537 PIAS2O75928 621 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 STK10O94804 968 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 SOD1P00441 154 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 CSF2P04141 144 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 NME1P15531 152 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 KCNA4P22459 653 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 TRIM23P36406 574 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 THOP1P52888 689 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 CCDC173Q0VFZ6 552 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 MPP3Q13368 585 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 OLIG2Q13516 323 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 NFATC4Q14934 902 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 SUZ12Q15022 739 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 SIRPB2Q5JXA9 342 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 KCTD16Q68DU8 428 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 PNCKQ6P2M8 343 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 SETD7Q8WTS6 366 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 FERMT1Q9BQL6 677 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 ABCG8Q9H221 673 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 TCEAL2Q9H3H9 227 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 UCKL1Q9NWZ5 548 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 JRKLQ9Y4A0 524 aa18.22■□□□□ 0.51
PDLIM7-216ENST00000506537 SCN8AQ9UQD0 1980 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms