RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 C2CD4BA6NLJ0 364 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 FOXO6A8MYZ6 492 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 KLRF2D3W0D1 207 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 IFNL4K9M1U5 179 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 UBE2CO00762 179 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 PRPF4O43172 522 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 UGDHO60701 494 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 MTA2O94776 668 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 NKX2-2O95096 273 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 WNT1P04628 370 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 SRPRAP08240 638 aaKnown RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 NHLRC4P0CG21 123 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 CTPS1P17812 591 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 ITGAXP20702 1163 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 TBXAS1P24557 533 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 EEF1DP29692 281 aaKnown RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 RFC1P35251 1148 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 CAMPP49913 170 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 CLCN5P51795 746 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 GALCP54803 685 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 UBXN2AP68543 259 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 IKQ13123 557 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 ITGADQ13349 1161 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 TNFAIP1Q13829 316 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 ADIPOQQ15848 244 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 KRT24Q2M2I5 525 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 TCTN1Q2MV58 587 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 C15orf59Q2T9L4 293 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 ASTE1Q2TB18 679 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 CCDC184Q52MB2 194 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 PLEKHO1Q53GL0 409 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 CXorf66Q5JRM2 361 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 IGFL4Q6B9Z1 124 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 CES5AQ6NT32 575 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 FBXO42Q6P3S6 717 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 FAM57BQ71RH2 274 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 UBE2Q1Q7Z7E8 422 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 VSIG1Q86XK7 387 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLC25A41Q8N5S1 370 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 MCPH1Q8NEM0 835 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 APPL2Q8NEU8 664 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 CMASQ8NFW8 434 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 NELL1Q92832 810 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZNF419Q96HQ0 510 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZNF333Q96JL9 665 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 SPATA17Q96L03 361 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 GCNAQ96QF7 691 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 OR2A14Q96R47 310 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 C1QTNF1Q9BXJ1 281 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 IFIH1Q9BYX4 1025 aaKnown RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 CDT1Q9H211 546 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 NDST4Q9H3R1 872 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 RNF146Q9NTX7 359 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 SEL1LQ9UBV2 794 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 PLEKHB1Q9UF11 243 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 UTS2RQ9UKP6 389 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLC4A4Q9Y6R1 1079 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 ROCK1Q13464 1354 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 PNPLA6Q8IY17 1366 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 NEXMIFQ5QGS0 1516 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 SETBP1Q9Y6X0 1596 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 NALCNQ8IZF0 1738 aa3.33□□□□□ -1.88
TRAPPC11-205ENST00000506426 LOC100509620A0A075B734 347 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 OR2A25A4D2G3 310 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 HSPB2A8KAH6 182 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 FOXN1O15353 648 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 ATP2C2O75185 946 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 TBCAO75347 108 aaKnown RBP3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 TPPPO94811 219 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 TOP3BO95985 862 aaKnown RBP3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLPIP03973 132 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 MMP3P08254 477 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 UNGP13051 313 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 IL7RP16871 459 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 SRD5A1P18405 259 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 SHMT1P34896 483 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 CAPZA2P47755 286 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 STAT2P52630 851 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 PMS2P54278 862 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 MRPS5P82675 430 aaKnown RBP3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 ACSM2AQ08AH3 577 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 GRIK3Q13003 919 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZNF268Q14587 947 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 HSPB2Q16082 182 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 KYNUQ16719 465 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 USP41Q3LFD5 358 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLC9C1Q4G0N8 1177 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 TCP11X2Q5H9J9 407 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 C1orf141Q5JVX7 400 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 ENTPD8Q5MY95 495 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 C6orf141Q5SZD1 244 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 C1QTNF12Q5T7M4 302 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 LRCH2Q5VUJ6 765 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 ACSM2BQ68CK6 577 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZNF772Q68DY9 489 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 FCRLBQ6BAA4 426 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 LRRC8EQ6NSJ5 796 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 Q6ZPA2 131 aa3.32□□□□□ -1.88
TRAPPC11-205ENST00000506426 ARHGEF25Q86VW2 580 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms