RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 C8orf59Q8N0T1 100 aaPredicted RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 ZCCHC7Q8N3Z6 543 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 TXNDC5Q8NBS9 432 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 CCNYQ8ND76 341 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 ELMO2Q96JJ3 720 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 CSF3RQ99062 836 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 FUNDC2Q9BWH2 189 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 FZD8Q9H461 694 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 PRDM12Q9H4Q4 367 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 GDAP2Q9NXN4 497 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 SEPT10Q9P0V9 454 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 AFG3L2Q9Y4W6 797 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 A0A0J9YYE9 177 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 TCRBV5S2A0A599 114 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 AOC2O75106 756 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 GABARAPO95166 117 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 CD40LGP29965 261 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 AXLP30530 894 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 GRM5P41594 1212 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 RPL34P49207 117 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 MRPL19P49406 292 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 RGS7P49802 495 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 AIF1P55008 147 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 EEFSECP57772 596 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 POU4F1Q01851 419 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 GRIK2Q13002 908 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 SELENBP1Q13228 472 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 DEFB115Q30KQ5 88 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 TMEM214Q6NUQ4 689 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 LAYNQ6UX15 382 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 DPH6Q7L8W6 267 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 GABPB2Q8TAK5 448 aaPredicted RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 PHF10Q8WUB8 498 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 CPB2Q96IY4 423 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 DHRS1Q96LJ7 313 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 NDEL1Q9GZM8 345 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 ATP13A3Q9H7F0 1226 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■■□ 24
SCLT1-208ENST00000506368 WARS2Q9UGM6 360 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 SFMBT1Q9UHJ3 866 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 BAG5Q9UL15 447 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 NAALAD2Q9Y3Q0 740 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 PCDHGB1Q9Y5G3 927 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 FAM95CA0A1B0GW59 222 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 TPD52L2O43399 206 aaKnown RBP15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SUPT7LO94864 414 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SNAP29O95721 258 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 CLIC3O95833 236 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 BMP1P13497 986 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 PTPN3P26045 913 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 RBP5P82980 135 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 CD300CQ08708 224 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 LAMTOR4Q0VGL1 99 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 FXNQ16595 210 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 AGAP9Q5VTM2 703 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SPRYD7Q5W111 196 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 ARHGAP17Q68EM7 881 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 TUBA3EQ6PEY2 450 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 AKAP14Q86UN6 197 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 ARMC8Q8IUR7 673 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 FUNDC1Q8IVP5 155 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 RNF139Q8WU17 664 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 NXNL1Q96CM4 212 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 OSBPL2Q9H1P3 480 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 TMEM45AQ9NWC5 275 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 MAP10Q9P2G4 905 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 UGT2A1Q9Y4X1 527 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SAGE2PA6NJ88 616 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 KRT75O95678 551 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 NPPAP01160 153 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 NFICP08651 508 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 CXCL8P10145 99 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SLC6A2P23975 617 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 ETFBP38117 255 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 HMGCS2P54868 508 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 CAMK2BQ13554 666 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 KRR1Q13601 381 aaKnown RBP15.9■□□□□ 0.14
SCLT1-208ENST00000506368 DAG1Q14118 895 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SPCS2Q15005 226 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 ACOX1Q15067 660 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 PRR23BQ6ZRT6 265 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SLC16A12Q6ZSM3 486 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SLCO6A1Q86UG4 719 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SCUBE3Q8IX30 993 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 SLC7A5P1Q8MH63 180 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 MIER2Q8N344 545 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 CCDC185Q8N715 623 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 RNF149Q8NC42 400 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 ZNF280CQ8ND82 737 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 ACVR1CQ8NER5 493 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 CALML6Q8TD86 181 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 LRRC58Q96CX6 371 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 MOCOSQ96EN8 888 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 MUS81Q96NY9 551 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 DKK3Q9UBP4 350 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 PCDHA9Q9Y5H5 950 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 NOX1Q9Y5S8 564 aa15.9■□□□□ 0.14
SCLT1-208ENST00000506368 MN1Q10571 1320 aaPredicted RBP15.89■□□□□ 0.13
SCLT1-208ENST00000506368 FNDC1Q4ZHG4 1894 aaPredicted RBP15.89■□□□□ 0.13
SCLT1-208ENST00000506368 F5H423 210 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms