RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SOCS6O14544 535 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 TNFRSF10CO14798 259 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 SMAD7O15105 426 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 CLIC2O15247 247 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 TM7SF2O76062 418 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 IPO13O94829 963 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PRPF6O94906 941 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 ZWINTO95229 277 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 VNN1O95497 513 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 CD160O95971 181 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 LDHAP00338 332 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 IFNA2P01563 188 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 TNNC2P02585 160 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 MT-ND3P03897 115 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RAF1P04049 648 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 ALPPP05187 535 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 FYNP06241 537 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 HMGB1P09429 215 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RAB40ALP0C0E4 278 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 UNGP13051 313 aaPredicted RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 GM2AP17900 193 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 CD53P19397 219 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RPS6KB1P23443 525 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 CFPP27918 469 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 GKP32189 559 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 ASPAP45381 313 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 SLC11A2P49281 568 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RRADP55042 308 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 DLX5P56178 289 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 KIAA1024LP59773 190 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RPS15P62841 145 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 NKX6-1P78426 367 aaPredicted RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 DEFA6Q01524 100 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 INCA1Q0VD86 236 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RAPGEF1Q13905 1077 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 AGERQ15109 404 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 KYNUQ16719 465 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PLA2G4EQ3MJ16 856 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RNF20Q5VTR2 975 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 BSPRYQ5W0U4 402 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 C22orf39Q6P5X5 142 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 SCARA5Q6ZMJ2 495 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 NLRP8Q86W28 1048 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 UNC93AQ86WB7 457 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 HIPK1Q86Z02 1210 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RASGRP3Q8IV61 690 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 DIS3L2Q8IYB7 885 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 LGI2Q8N0V4 545 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 ARHGAP18Q8N392 663 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 MARVELD2Q8N4S9 558 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 ENDOVQ8N8Q3 282 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 DNAAF3Q8N9W5 541 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 CATSPER1Q8NEC5 780 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PLEKHO2Q8TD55 490 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 SLC37A2Q8TED4 501 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 COG1Q8WTW3 980 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PHF10Q8WUB8 498 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 NCSTNQ92542 709 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 RAB7BQ96AH8 199 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 NACC2Q96BF6 587 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 SDCCAG3Q96C92 435 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 SGSM3Q96HU1 749 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PPP1R16AQ96I34 528 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 C9orf72Q96LT7 481 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 Q96MF0 132 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PLIN2Q99541 437 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 ULBP1Q9BZM6 244 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 UCK2Q9BZX2 261 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 ADAM19Q9H013 955 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 CHST8Q9H2A9 424 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 CLEC4MQ9H2X3 399 aaPredicted RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PCIF1Q9H4Z3 704 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PLEKHF2Q9H8W4 249 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 OLA1Q9NTK5 396 aaKnown RBP3.33□□□□□ -1.88
TCOF1-208ENST00000506063 BLOC1S4Q9NUP1 217 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 KLHL3Q9UH77 587 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 SLC25A13Q9UJS0 675 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 SLC30A1Q9Y6M5 507 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 MALRD1Q5VYJ5 2156 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 CMYA5Q8N3K9 4069 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 PCLOQ9Y6V0 5065 aa3.33□□□□□ -1.88
TCOF1-208ENST00000506063 FAM237BA0A1B0GVD1 139 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 A0A1W2PPR1 153 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 PRSS38A1L453 326 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TCAF2A6NFQ2 919 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 DRGXA6NNA5 263 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 RASA4BC9J798 803 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ZW10O43264 779 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 RASA4O43374 803 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 KIF1CO43896 1103 aaKnown RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 KLF7O75840 302 aaPredicted RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 FAM13AO94988 1023 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ZBED1O96006 694 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 CEACAM5P06731 702 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 HOXC4P09017 264 aaPredicted RBP3.32□□□□□ -1.88
TCOF1-208ENST00000506063 TACR2P21452 398 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 UGT1A4P22310 534 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 HTR1BP28222 390 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 GJB2P29033 226 aa3.32□□□□□ -1.88
TCOF1-208ENST00000506063 ATICP31939 592 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms