RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 NOBOXO60393 691 aa21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 BUB1BO60566 1050 aaPredicted RBP21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 CPP00450 1065 aa21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 GOLGA6DP0CG33 693 aa21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 CSTF2P33240 577 aaKnown RBP eCLIP21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 SERPINB6P35237 376 aa21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 KIF26BQ2KJY2 2108 aa21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 PLA2G15Q8NCC3 412 aa21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 ASPSCR1Q9BZE9 553 aa21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 GOLGA6AQ9NYA3 693 aa21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 LIMA1Q9UHB6 759 aaKnown RBP21.06■□□□□ 0.96
SQSTM1-210ENST00000506042 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 ERCC2P18074 760 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 VIPR1P32241 457 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 RALGDSQ12967 914 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 AMZ1Q400G9 498 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 IL22RA1Q8N6P7 574 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 AGBL5Q8NDL9 886 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 FNIP1Q8TF40 1166 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 SPOCK2Q92563 424 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 AHCYL2Q96HN2 611 aaKnown RBP21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 TAAR9Q96RI9 348 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 NAT10Q9H0A0 1025 aaKnown RBP21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 ADNPQ9H2P0 1102 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 MRPL40Q9NQ50 206 aaKnown RBP21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 DNPEPQ9ULA0 475 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 PHTF1Q9UMS5 762 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 PCDHGA4Q9Y5G9 962 aa21.05■□□□□ 0.96
SQSTM1-210ENST00000506042 TCRBV5S1A1TA0A578 114 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 GOLGA6L22H0YM25 854 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 EPHB6O15197 1021 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 CAPN5O15484 640 aaPredicted RBP21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 ARHGAP6O43182 974 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 PRKCGP05129 697 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 ITIH1P19827 911 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 CA4P22748 312 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 TEAD1P28347 426 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 TGIF1Q15583 401 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 STX1AQ16623 288 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 RAET1GQ6H3X3 334 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 TMCO3Q6UWJ1 677 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 HEATR4Q86WZ0 1026 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 SLITRK4Q8IW52 837 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 EXTL1Q92935 676 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 SNRNP25Q9BV90 132 aaKnown RBP21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 B4GALT6Q9UBX8 382 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 PCSK1NQ9UHG2 260 aa21.04■□□□□ 0.96
SQSTM1-210ENST00000506042 RAB15P59190 212 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 GPLD1P80108 840 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 MAMLD1Q13495 774 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 FILIP1LQ4L180 1135 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 DENND2CQ68D51 928 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 ZSWIM9Q86XI8 627 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 KIAA1143Q96AT1 154 aaPredicted RBP21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 CATSPER2Q96P56 530 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 NUDCD1Q96RS6 583 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 EFHD1Q9BUP0 239 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 TEX101Q9BY14 249 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 SUDS3Q9H7L9 328 aaPredicted RBP21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 STARD5Q9NSY2 213 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 GPATCH2LQ9NWQ4 482 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 TAAR2Q9P1P5 351 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 IL17BQ9UHF5 180 aa21.03■□□□□ 0.96
SQSTM1-210ENST00000506042 MYBL1P10243 752 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 GNPDA1P46926 289 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 CDH6P55285 790 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 NR1D2Q14995 579 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 PLEKHA7Q6IQ23 1121 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 ZNF438Q7Z4V0 828 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 ZFAND4Q86XD8 727 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 ATPAF2Q8N5M1 289 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 OR4D9Q8NGE8 314 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 COQ10AQ96MF6 247 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 TEFMQ96QE5 360 aaKnown RBP21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 RDH14Q9HBH5 336 aa21.02■□□□□ 0.96
SQSTM1-210ENST00000506042 SCN8AQ9UQD0 1980 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 MGAQ8IWI9 3026 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 A8MX80 341 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 TMCO5BA8MYB1 307 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 TRAFD1O14545 582 aaPredicted RBP21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 HEXIM1O94992 359 aaKnown RBP21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 IVLP07476 585 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 SLC2A4P14672 509 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 GPR1P46091 355 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 RGRP47804 291 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 B4GALNT1Q00973 533 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 LRP8Q14114 963 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 BOLA3Q53S33 107 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 ARMC12Q5T9G4 340 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 MARC1Q5VT66 337 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 BORAQ6PGQ7 559 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 SLC30A9Q6PML9 568 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 DTX1Q86Y01 620 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 LRRC49Q8IUZ0 686 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 AVL9Q8NBF6 648 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 OR10G6Q8NH81 332 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 DTD2Q96FN9 168 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 GBP4Q96PP9 640 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 DDA1Q9BW61 102 aa21.01■□□□□ 0.95
SQSTM1-210ENST00000506042 SEMA6CQ9H3T2 930 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms