RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SPATA6LQ8N4H0 392 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 INTS12Q96CB8 462 aaKnown RBP3.91□□□□□ -1.78
CHD1-203ENST00000505657 RTP4Q96DX8 246 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 MMABQ96EY8 250 aaPredicted RBP3.91□□□□□ -1.78
CHD1-203ENST00000505657 ADGRG7Q96K78 797 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 RANBP17Q9H2T7 1088 aaKnown RBP3.91□□□□□ -1.78
CHD1-203ENST00000505657 PPP1R3EQ9H7J1 279 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 HINT3Q9NQE9 182 aaKnown RBP3.91□□□□□ -1.78
CHD1-203ENST00000505657 C1RLQ9NZP8 487 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 MALT1Q9UDY8 824 aa3.91□□□□□ -1.78
CHD1-203ENST00000505657 AAR2Q9Y312 384 aaKnown RBP3.91□□□□□ -1.78
CHD1-203ENST00000505657 VCYO14598 125 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 PAGE4O60829 102 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 SEC14L2O76054 403 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 MBD4O95243 580 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 PMS2P2O95744 297 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 CLEC3BP05452 202 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 LINC00271P0C7V0 271 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 CD58P19256 250 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 METAP2P50579 478 aaKnown RBP eCLIP3.9□□□□□ -1.79
CHD1-203ENST00000505657 RARSP54136 660 aaKnown RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 RPL7AP62424 266 aaKnown RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 EEF1A2Q05639 463 aaKnown RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 COASYQ13057 564 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 SNTA1Q13424 505 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 FRG1Q14331 258 aaKnown RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 DRAP1Q14919 205 aaPredicted RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 OASLQ15646 514 aaKnown RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 CAPRIN2Q6IMN6 1127 aaKnown RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 PLEKHA7Q6IQ23 1121 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 TSSK4Q6SA08 328 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 CYP20A1Q6UW02 462 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 SLC36A4Q6YBV0 504 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 PQLC2Q6ZP29 291 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 TAOK1Q7L7X3 1001 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 WDR63Q8IWG1 891 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 DSELQ8IZU8 1212 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 TDRD7Q8NHU6 1098 aaKnown RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 SPATA3Q8NHX4 192 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 MPP4Q96JB8 637 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 FAM84BQ96KN1 310 aaPredicted RBP3.9□□□□□ -1.79
CHD1-203ENST00000505657 C3orf30Q96M34 536 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 WDFY2Q96P53 400 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 STRA6Q9BX79 667 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 C1QTNF4Q9BXJ3 329 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 NDST4Q9H3R1 872 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 POLR1BQ9H9Y6 1135 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 C17orf75Q9HAS0 396 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 ASAH2Q9NR71 780 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 AASSQ9UDR5 926 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 HAO1Q9UJM8 370 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 KCNS2Q9ULS6 477 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 PSAT1Q9Y617 370 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 NFS1Q9Y697 457 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 PIAS3Q9Y6X2 628 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 CNTNAP2Q9UHC6 1331 aa3.9□□□□□ -1.79
CHD1-203ENST00000505657 FAM237AA0A1B0GTK4 181 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 PLSCR5A0PG75 271 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 SMTNL1A8MU46 457 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 BTBD18B2RXH4 712 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 MID1O15344 667 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 EPB41L2O43491 1005 aaKnown RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 DDNO94850 711 aaPredicted RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 TMEM63AO94886 807 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 NKX2-2O95096 273 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 SPARCP09486 303 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 F2RL1P55085 397 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 RPS3AP61247 264 aaKnown RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 ZNF155Q12901 538 aaPredicted RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 SLC39A14Q15043 492 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 CALCRLQ16602 461 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 USP41Q3LFD5 358 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 ATP13A5Q4VNC0 1218 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 C6orf141Q5SZD1 244 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 ZNF280DQ6N043 979 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 NEK10Q6ZWH5 1172 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 CHERPQ8IWX8 916 aaKnown RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 PAF1Q8N7H5 531 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 TMEM116Q8NCL8 245 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 IGSF8Q969P0 613 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 LMLNQ96KR4 655 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 C7orf26Q96N11 449 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 PCYT2Q99447 389 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 KXD1Q9BQD3 176 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 MMTAG2Q9BU76 263 aaKnown RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 UNC45AQ9H3U1 944 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 PRKRIP1Q9H875 184 aaPredicted RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 DDX31Q9H8H2 851 aaKnown RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 SEBOXQ9HB31 216 aaPredicted RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 SMC4Q9NTJ3 1288 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 IRAK4Q9NWZ3 460 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 CNOT8Q9UFF9 292 aaKnown RBP3.89□□□□□ -1.79
CHD1-203ENST00000505657 ERVK-11Q9UQG0 969 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 ADAM18Q9Y3Q7 739 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 UTYO14607 1347 aa3.89□□□□□ -1.79
CHD1-203ENST00000505657 NOTCH4Q99466 2003 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 A0A1B0GUV1 79 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 TTC36A6NLP5 189 aa3.88□□□□□ -1.79
CHD1-203ENST00000505657 EIF3CLB5ME19 914 aaKnown RBP3.88□□□□□ -1.79
CHD1-203ENST00000505657 ZNF587BE7ETH6 402 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms