RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 RSL1D1O76021 490 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 PTBP3O95758 552 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ONECUT2O95948 504 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 SERPINC1P01008 464 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TGFB1P01137 390 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 OPN1MWP04001 364 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 HIST1H2ABP04908 130 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 SERPING1P05155 500 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 OPN1MW2P0DN77 364 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 OPN1MW3P0DN78 364 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 HSPA5P11021 654 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 FCGR2AP12318 317 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF28P17035 718 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 HIST1H2ADP20671 130 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 FBLN1P23142 703 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TNFRSF8P28908 595 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 GKP32189 559 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CHRNA3P32297 505 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 SERPINB6P35237 376 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ACAA2P42765 397 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 VPS41P49754 854 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 BLKP51451 505 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF75DP51815 510 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TPTEP56180 551 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ACTR1AP61163 376 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 SORDQ00796 357 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 DMWDQ09019 674 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 COX10Q12887 443 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 MTA1Q13330 715 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 DNASE1L3Q13609 305 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 HLXQ14774 488 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 PGM5Q15124 567 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CNGA3Q16281 694 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CSRP2Q16527 193 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 RNF151Q2KHN1 245 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 PCGF3Q3KNV8 242 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 RABL6Q3YEC7 729 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 FUT11Q495W5 492 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 GLE1Q53GS7 698 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TAF1BQ53T94 588 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 HSP90AB3PQ58FF7 597 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CXorf66Q5JRM2 361 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TREML2Q5T2D2 321 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 LRIF1Q5T3J3 769 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 DENND2CQ68D51 928 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 PLA2G4FQ68DD2 849 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TXNDC8Q6A555 127 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 DHRS7BQ6IAN0 325 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC25A24Q6NUK1 477 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 LCTLQ6UWM7 567 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 INTS8Q75QN2 995 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 HIST3H2AQ7L7L0 130 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CCDC83Q8IWF9 413 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TP53INP2Q8IXH6 220 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 KDM8Q8N371 416 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 POU5F2Q8N7G0 328 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 LINC00482Q8N8I6 264 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 PNPLA1Q8N8W4 532 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 OR14L1PQ8NHC6 308 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 UBLCP1Q8WVY7 318 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 DNASE1L2Q92874 299 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TUBGCP3Q96CW5 907 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ERLEC1Q96DZ1 483 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CHFRQ96EP1 664 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 RRNAD1Q96FB5 475 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 BORCS6Q96GS4 357 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 C5orf30Q96GV9 206 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADAD1Q96M93 576 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF560Q96MR9 790 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 SYT17Q9BSW7 474 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 GTPBP2Q9BX10 602 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADGRE3Q9BY15 652 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 OSBPL8Q9BZF1 889 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 AMBRA1Q9C0C7 1298 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 NUAK2Q9H093 628 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 RIBC2Q9H4K1 309 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 MINDY3Q9H8M7 445 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 NGBQ9NPG2 151 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ABHD10Q9NUJ1 306 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 TAS2R14Q9NYV8 317 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 HMG20BQ9P0W2 317 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 FBXO4Q9UKT5 387 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 MTUS1Q9ULD2 1270 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CCPG1Q9ULG6 757 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 SNX6Q9UNH7 406 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 EXO1Q9UQ84 846 aaKnown RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CTNND2Q9UQB3 1225 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 CARD8Q9Y2G2 431 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 PKP3Q9Y446 797 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 HEMK1Q9Y5R4 338 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 UTYO14607 1347 aa3.68□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARHGAP42A6NI28 874 aa3.67□□□□□ -1.82
HMGB1P22-201ENST00000505315 CGB1A6NKQ9 187 aa3.67□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC16A3O15427 465 aaKnown RBP3.67□□□□□ -1.82
HMGB1P22-201ENST00000505315 PRAMEF2O60811 474 aa3.67□□□□□ -1.82
HMGB1P22-201ENST00000505315 ATP2C2O75185 946 aa3.67□□□□□ -1.82
HMGB1P22-201ENST00000505315 PRDM1O75626 825 aa3.67□□□□□ -1.82
HMGB1P22-201ENST00000505315 LETM1O95202 739 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P22-201ENST00000505315 SIX3O95343 332 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms