RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 FBXO25Q8TCJ0 367 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 DTX3LQ8TDB6 740 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 GRK7Q8WTQ7 553 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 PPP1R16AQ96I34 528 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 BMFQ96LC9 184 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 RUNDC3BQ96NL0 473 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 LENG8Q96PV6 779 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-208ENST00000504788 RANBP9Q96S59 729 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 TBL1YQ9BQ87 522 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 HINFPQ9BQA5 517 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 FICDQ9BVA6 458 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 BTBD1Q9H0C5 482 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 PCED1AQ9H1Q7 454 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 EPC1Q9H2F5 836 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 CAAP1Q9H8G2 361 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 LRRC40Q9H9A6 602 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 PREBQ9HCU5 417 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 MBNL1Q9NR56 388 aaKnown RBP4.95□□□□□ -1.62
LMNB1-208ENST00000504788 ZSCAN32Q9NX65 697 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 WHRNQ9P202 907 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 FEZ2Q9UHY8 353 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-208ENST00000504788 CNOT6Q9ULM6 557 aaKnown RBP4.95□□□□□ -1.62
LMNB1-208ENST00000504788 TPX2Q9ULW0 747 aaKnown RBP4.95□□□□□ -1.62
LMNB1-208ENST00000504788 SHOC2Q9UQ13 582 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 INVSQ9Y283 1065 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 PCDHGA2Q9Y5H1 932 aa4.95□□□□□ -1.62
LMNB1-208ENST00000504788 EP300Q09472 2414 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ASPMQ8IZT6 3477 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CABIN1Q9Y6J0 2220 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 TRBV5-4A0A0C4DH59 114 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 A0A1W2PPC4 97 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 A0A1W2PQU0 124 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 A0A1W2PR77 199 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CTAGE15A4D2H0 777 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 POM121BA6NF01 834 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 IGLON5A6NGN9 336 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 FADS2P1A8MWK0 482 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 PROB1E7EW31 1015 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 GPR39O43194 453 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 MMP20O60882 483 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 RNASEH1O60930 286 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 BANF1O75531 89 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ALDH1A2O94788 518 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 SEMA4FO95754 770 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 FUCA1P04066 466 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 WNT1P04628 370 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CTAGE8P0CG41 777 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 BPIP17213 487 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 TPH1P17752 444 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 OXTRP30559 389 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 VIPR1P32241 457 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CNR2P34972 360 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 IGFALSP35858 605 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ETV3P41162 512 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 NBL1P41271 181 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ARCN1P48444 511 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 SPINT3P49223 89 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 LIG3P49916 1009 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ARSDP51689 593 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ITGA8P53708 1063 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 DCDC1P59894 354 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 POLR2LP62875 67 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CRADDP78560 199 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 BASP1P80723 227 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 BNC1Q01954 994 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CKAP4Q07065 602 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 DPTQ07507 201 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CDH17Q12864 832 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 MTM1Q13496 603 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 NAA30Q147X3 362 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 FASTKD3Q14CZ7 662 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 MORF4L2Q15014 288 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 WSCD2Q2TBF2 565 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 TTC31Q49AM3 519 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 GLE1Q53GS7 698 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 NAPEPLDQ6IQ20 393 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 FBXL19Q6PCT2 694 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 GCNT7Q6ZNI0 430 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 Q6ZVL8 140 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 MAATS1Q7Z4T9 603 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 ABI3BPQ7Z7G0 1075 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CTAGE6Q86UF2 777 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 FAM124AQ86V42 546 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 HORMAD1Q86X24 394 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CTAGE4Q8IX94 777 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 PPIL6Q8IXY8 311 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 RYBPQ8N488 228 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 SLC25A41Q8N5S1 370 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 PLA2G15Q8NCC3 412 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 OR14C36Q8NHC7 312 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 BRSK1Q8TDC3 778 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 PDCD6IPQ8WUM4 868 aaKnown RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 PEX13Q92968 403 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 CCDC97Q96F63 343 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 DTD2Q96FN9 168 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 SGSM3Q96HU1 749 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 FCRL3Q96P31 734 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-208ENST00000504788 PPP1R2P1Q96PQ5 205 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 AGAP2Q99490 1192 aa4.94□□□□□ -1.62
LMNB1-208ENST00000504788 MCMBPQ9BTE3 642 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms