RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 NEMP2A6NFY4 417 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 VCLP18206 1134 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 GALNT2Q10471 571 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 CDC16Q13042 620 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 MED21Q13503 144 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 TDRPQ86YL5 185 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 COLGALT2Q8IYK4 626 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 RBFAQ8N0V3 343 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ACAT2Q9BWD1 397 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 RAP2CQ9Y3L5 183 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 CNTRLQ7Z7A1 2325 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 GLYATL1P3A0A0U1RQE8 302 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 IQCF5A8MTL0 148 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 PRR5-ARHGAP8B1AHC4 643 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 AGRPO00253 132 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 BIRC5O15392 142 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ABCB1P08183 1280 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ARHGAP8P85298 464 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 GPM6BQ13491 265 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 PDE1CQ14123 709 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ZBTB6Q15916 424 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ARL13AQ5H913 290 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 BANPQ8N9N5 519 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 KLHL23Q8NBE8 558 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ZSCAN18Q8TBC5 510 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 DIS3LQ8TF46 1054 aaKnown RBP14.11□□□□□ -0.15
TCOF1-207ENST00000504761 POF1BQ8WVV4 589 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 SELENOMQ8WWX9 145 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 PPP1R16AQ96I34 528 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 C1orf50Q9BV19 199 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ADAM7Q9H2U9 754 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 PNPLA8Q9NP80 782 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 POLG2Q9UHN1 485 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 ZNF180Q9UJW8 692 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 NDUFAF1Q9Y375 327 aa14.11□□□□□ -0.15
TCOF1-207ENST00000504761 OR2AG2A6NM03 316 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 PSMD12O00232 456 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 ALPIP09923 528 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 LINC00032P0C843 101 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 WARS2Q9UGM6 360 aaKnown RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 LAMB1P07942 1786 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 NPEPPSL1A6NEC2 478 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 H3BMM5 538 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 COCHO43405 550 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 ALDH9A1P49189 494 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 IRF9Q00978 393 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 ATAT1Q5SQI0 421 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 RNF43Q68DV7 783 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 GRASPQ7Z6J2 395 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 FSTL5Q8N475 847 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 FLCNQ8NFG4 579 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 BRSK1Q8TDC3 778 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 KLHL32Q96NJ5 620 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 SLC2A13Q96QE2 648 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 EIF2B3Q9NR50 452 aaKnown RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 WNT6Q9Y6F9 365 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 MAP1BP46821 2468 aaKnown RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 CCDC162PA2VCL2 907 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 UBTFL6P0CB48 400 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 HGFP14210 728 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 ARL4DP49703 201 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 ARMC6Q6NXE6 501 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 TAGAPQ8N103 731 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 FITM2Q8N6M3 262 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 CYGBQ8WWM9 190 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 SIGLEC10Q96LC7 697 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 GATA5Q9BWX5 397 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 DCLRE1BQ9H816 532 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 ZNF395Q9H8N7 513 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-207ENST00000504761 PSAT1Q9Y617 370 aa14.1□□□□□ -0.15
TCOF1-207ENST00000504761 UGT1A6P19224 532 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 UGT1A1P22309 533 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 UGT1A4P22310 534 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 IFNA8P32881 189 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 UGT1A3P35503 534 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 UGT1A5P35504 534 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 MSX2P35548 267 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 PRIM2P49643 509 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 KPNB1Q14974 876 aaKnown RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 UBAP2Q5T6F2 1119 aaKnown RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 MRPL10Q7Z7H8 261 aaKnown RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 CAND1Q86VP6 1230 aaKnown RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 DCAKDQ8WVC6 231 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 IGSF8Q969P0 613 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 VPS50Q96JG6 964 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 TIMM22Q9Y584 194 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 C1QTNF3-AMACRE9PGA6 284 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 ATP6V1G2O95670 118 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 ALOX15P16050 662 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 CYP51A1Q16850 503 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 MSANTD2Q6P1R3 559 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 PSRC1Q6PGN9 363 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 METTL3Q86U44 580 aaKnown RBP14.09□□□□□ -0.15
TCOF1-207ENST00000504761 SEPHS2Q99611 448 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 FBXO10Q9UK96 956 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 CROTQ9UKG9 612 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 H0YGN5 161 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 CDK14O94921 469 aa14.09□□□□□ -0.15
TCOF1-207ENST00000504761 HNF4AP41235 474 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms