RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 GBP7Q8N8V2 638 aaPredicted RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 PPHLN1Q8NEY8 458 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 MYRIPQ8NFW9 859 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 RFWD2Q8NHY2 731 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SUN5Q8TC36 379 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SLC2A12Q8TD20 617 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 C2CD4CQ8TF44 421 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 DNAAF4Q8WXU2 420 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SORCS1Q8WY21 1168 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 KIAA1191Q96A73 305 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SKA1Q96BD8 255 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 TBC1D20Q96BZ9 403 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 OR1F2PQ96R84 312 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 TUBA1CQ9BQE3 449 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SLC39A3Q9BRY0 314 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 MRPL9Q9BYD2 267 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 ABCG4Q9H172 646 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 UBTD1Q9HAC8 227 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 RIC8AQ9NPQ8 531 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SCRT2Q9NQ03 307 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 HOMER3Q9NSC5 361 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 ARGLU1Q9NWB6 273 aaPredicted RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 PSD3Q9NYI0 1048 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 OGFRQ9NZT2 677 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPATA7Q9P0W8 599 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 CFDP1Q9UEE9 299 aaPredicted RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 RSPH14Q9UHP6 348 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 GTF3C4Q9UKN8 822 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 BAG5Q9UL15 447 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 WDR37Q9Y2I8 494 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 RRP15Q9Y3B9 282 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 JRKLQ9Y4A0 524 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 PCDHGB2Q9Y5G2 931 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 N6AMT1Q9Y5N5 214 aa2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPAG9O60271 1321 aaKnown RBP2.1□□□□□ -2.07
HMGB3P17-201ENST00000504195 IGHV4OR15-8A0A075B7B6 117 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 A0A0A0MQY5 61 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM90A18PA6NE21 464 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM90A16PA6NEW6 464 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 NPIPB13A6NJU9 1138 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM90A9PA6NNJ1 464 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 NPIPB5A8MRT5 1133 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM90A5PA8MXJ8 464 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 NPIPB4C9JG80 1138 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 BOLA2-SMG1P6H3BVE0 249 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 MCF2LO15068 1137 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 POLR3GO15318 223 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 TTI1O43156 1089 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CEP104O60308 925 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CRYAAP02489 173 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 AFPP02771 609 aaKnown RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 TPM1P09493 284 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM90A15PP0C7V4 464 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM90A14PP0C7W9 464 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 PRG2P13727 222 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 IDO1P14902 403 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FERP16591 822 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 RRM1P23921 792 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 IL4RP24394 825 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CHMLP26374 656 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FMO4P31512 558 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 HSPA4P34932 840 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FNTAP49354 379 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SNX16P57768 344 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 NUCB1Q02818 461 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CYP4A11Q02928 519 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 MRPL28Q13084 256 aaKnown RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 G3BP1Q13283 466 aaKnown RBP eCLIP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 DHX34Q14147 1143 aaKnown RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 RASA2Q15283 850 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 RPS6KA2Q15349 733 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 PUM3Q15397 648 aaKnown RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 GRAMD1BQ3KR37 738 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPECC1Q5M775 1068 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SLC10A5Q5PT55 438 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SH2D4BQ5SQS7 431 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 ARMC4Q5T2S8 1044 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC183Q5T5S1 534 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CFAP58Q5T655 872 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 NFRKBQ6P4R8 1299 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CFAP161Q6P656 301 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 PACS1Q6VY07 963 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC186Q7Z3E2 898 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CEP57Q86XR8 500 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 MYLK4Q86YV6 388 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 KRTAP7-1Q8IUC3 87 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM114A1Q8IWE2 563 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 KLHDC8BQ8IXV7 354 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SYTL1Q8IYJ3 562 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CPXCR1Q8N123 301 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 GALNT15Q8N3T1 639 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 CARNMT1Q8N4J0 409 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 TTC39CQ8N584 583 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 SCAIQ8N9R8 606 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 IL17RCQ8NAC3 791 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 MSANTD4Q8NCY6 345 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRIM58Q8NG06 486 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 PJA1Q8NG27 643 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 OR1N1Q8NGS0 311 aa2.09□□□□□ -2.07
HMGB3P17-201ENST00000504195 GSDMBQ8TAX9 411 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms