RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SHC3Q92529 594 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 SMARCE1Q969G3 411 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 TBC1D31Q96DN5 1066 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 PLCB1Q9NQ66 1216 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 RPS6KL1Q9Y6S9 549 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 LRBAP50851 2863 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 CELSR2Q9HCU4 2923 aa15.83■□□□□ 0.12
PDLIM7-210ENST00000503827 INPP4BO15327 924 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 MYCLP1P12525 358 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 DLSTP36957 453 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 PPP1R2P41236 205 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 GNPDA1P46926 289 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 GABRB2P47870 512 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 MARSP56192 900 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 TRIM65Q6PJ69 517 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 LIPIQ6XZB0 460 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 TMEM35BQ8NCS4 154 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 OR10G6Q8NH81 332 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 CRACR2AQ9BSW2 395 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 PDCL3Q9H2J4 239 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 APMAPQ9HDC9 416 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 PHPT1Q9NRX4 125 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 LHX3Q9UBR4 397 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 MAP4K5Q9Y4K4 846 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 CRYBG3Q68DQ2 2970 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 ABCA12Q86UK0 2595 aa15.82■□□□□ 0.12
PDLIM7-210ENST00000503827 POLR1CO15160 346 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 LRIG2O94898 1065 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 DLGAP3O95886 979 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 F8A1P23610 371 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 ERCC5P28715 1186 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 ADRA1BP35368 520 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 PMS2P54278 862 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 ATP11AP98196 1134 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 RALGDSQ12967 914 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 TRNP1Q6NT89 227 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 TTI2Q6NXR4 508 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 ARHGAP22Q7Z5H3 698 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 XYLT1Q86Y38 959 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 PAF1Q8N7H5 531 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 TUBGCP5Q96RT8 1024 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 SLC38A3Q99624 504 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 APEX2Q9UBZ4 518 aa15.81■□□□□ 0.12
PDLIM7-210ENST00000503827 FAM72CH0Y354 149 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 GOLGA8SH3BPF8 625 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 CLDN1O95832 211 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 PDGFAP04085 211 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 CEACAM5P06731 702 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 FURINP09958 794 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 SLC9A1P19634 815 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 CTBSQ01459 385 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 CYTH1Q15438 398 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 EIF2S3LQ2VIR3 472 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 FAM72AQ5TYM5 149 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 SMYD5Q6GMV2 418 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 KLHL10Q6JEL2 608 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 FAM72DQ6L9T8 149 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 WDR74Q6RFH5 385 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 SLC47A2Q86VL8 602 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 FAM72BQ86X60 149 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 ZSWIM9Q86XI8 627 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 CAMK1DQ8IU85 385 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 PRR7Q8TB68 274 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 TMEM59LQ9UK28 342 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 SUFUQ9UMX1 484 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 NEU3Q9UQ49 428 aa15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 OAS3Q9Y6K5 1087 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-210ENST00000503827 HIVEP3Q5T1R4 2406 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 BICDL2A1A5D9 508 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 CDC14CA4D256 554 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 BUB1BO60566 1050 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 KATNA1O75449 491 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 FUCA1P04066 466 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 PLEKP08567 350 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 SERPINA4P29622 427 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 ACTR1BP42025 376 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 YBEYP58557 167 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 ACTR1AP61163 376 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 ACOX1Q15067 660 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 CDO1Q16878 200 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 AFMIDQ63HM1 303 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 ISM2Q6H9L7 571 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 ARCQ7LC44 396 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 ZNF761Q86XN6 746 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 APLFQ8IW19 511 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 PELI3Q8N2H9 469 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 FRMD8Q9BZ67 464 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 SCAND2PQ9GZW5 306 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 NOL6Q9H6R4 1146 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 ATP13A3Q9H7F0 1226 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 UBA2Q9UBT2 640 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 KCND3Q9UK17 655 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 CROTQ9UKG9 612 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 C2CD3Q4AC94 2353 aa15.79■□□□□ 0.12
PDLIM7-210ENST00000503827 GM2AP17900 193 aa15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 CDH5P33151 784 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-210ENST00000503827 CLCN1P35523 988 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms