RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 MTHFSDQ2M296 383 aaKnown RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CCDC40Q4G0X9 1142 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 HSP90AB3PQ58FF7 597 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 RUNDC3AQ59EK9 446 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 C6orf163Q5TEZ5 329 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 C12orf60Q5U649 245 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 TCERG1LQ5VWI1 586 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 ETFRF1Q6IPR1 90 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 LAYNQ6UX15 382 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC30A10Q6XR72 485 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 PPP1R21Q6ZMI0 780 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 INTS8Q75QN2 995 aaKnown RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 KCTD9Q7L273 389 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 RRM2BQ7LG56 351 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CAMKMTQ7Z624 323 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM160B2Q86V87 743 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 TMEM200AQ86VY9 491 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 IQCF2Q8IXL9 164 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 KLHL7Q8IXQ5 586 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 SPARTQ8N0X7 666 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 FSTL5Q8N475 847 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 POU5F2Q8N7G0 328 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 NHLRC2Q8NBF2 726 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 ATAD1Q8NBU5 361 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 PDPRQ8NCN5 879 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CCDC110Q8TBZ0 833 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 TEKT4Q8WW24 435 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC13A3Q8WWT9 602 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CNOT9Q92600 299 aaKnown RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 KCNJ9Q92806 393 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM149B1Q96BN6 582 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 LRRC37BQ96QE4 947 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 GAL3ST4Q96RP7 486 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 LMF1Q96S06 567 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 HAPLN3Q96S86 360 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 GPHA2Q96T91 129 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CPPED1Q9BRF8 314 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZPBPQ9BS86 351 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC25A23Q9BV35 468 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 KIFC3Q9BVG8 833 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 GLIS2Q9BZE0 524 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 GOLPH3LQ9H4A5 285 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 EPHX3Q9H6B9 360 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 NRDE2Q9H7Z3 1164 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 CD93Q9NPY3 652 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 POLE3Q9NRF9 147 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 DDX18Q9NVP1 670 aaKnown RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 IL1RAPL1Q9NZN1 696 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 PCSK1NQ9UHG2 260 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 TSPYL4Q9UJ04 414 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 OAZ3Q9UMX2 235 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 MTMR6Q9Y217 621 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC27A6Q9Y2P4 619 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 LIPGQ9Y5X9 500 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 MYH14Q7Z406 1995 aaKnown RBP4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 SCN11AQ9UI33 1791 aa4.4□□□□□ -1.71
HMGB1P21-201ENST00000502313 UBR3Q6ZT12 1888 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 C4BP0C0L5 1744 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 TJP1Q07157 1748 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 LOC102723996A0A087X1L8 192 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 PMS2P1A4D2B8 440 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 MBD3L5A6NJ08 208 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM90A8PA6NJQ4 464 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 H0YCG3 227 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 HOXA3O43365 443 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 NUAK1O60285 661 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 DIRAS3O95661 229 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 KLKB1P03952 638 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 ITGB1P05556 798 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM90A13PP0C7W8 464 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM90A24PP0C7X0 464 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 MED14OSP0DP75 135 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 SRCP12931 536 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 PRG2P13727 222 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 ARSAP15289 507 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF8P17098 575 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 KRT4P19013 534 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 GDI1P31150 447 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 RPS19P39019 145 aaKnown RBP4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 PCP4P48539 62 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 CAMPP49913 170 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 GATMP50440 423 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 MVDP53602 400 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 RIPK4P57078 832 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 LINC00310P59036 64 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 KIAA1024LP59773 190 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 STX1BP61266 288 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 HHEXQ03014 270 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 HGFACQ04756 655 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 CDK18Q07002 472 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 GOLGA8FQ08AF8 430 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 TEFQ10587 303 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 TCF15Q12870 199 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 CSTF3Q12996 717 aaKnown RBP4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 TRADDQ15628 312 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 TBR1Q16650 682 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 GSTA3Q16772 222 aa4.39□□□□□ -1.71
HMGB1P21-201ENST00000502313 GEN1Q17RS7 908 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms