RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 FAM205CA6NFA0 338 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 RNASEH1O60930 286 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 SPRP35270 261 aaPredicted RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 RAB30Q15771 203 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 KYAT3Q6YP21 454 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 AADATQ8N5Z0 425 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 EI24O14681 340 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 INMTO95050 263 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF182P17025 639 aaPredicted RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 TATP17735 454 aaPredicted RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 PEA15Q15121 130 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 ZBTB6Q15916 424 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF404Q494X3 552 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 FBXO48Q5FWF7 155 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 C15orf52Q6ZUT6 534 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 PTERQ96BW5 349 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 LGMNQ99538 433 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 MROH8Q9H579 483 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 PLCE1Q9P212 2302 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 ARL5CA6NH57 179 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF197O14709 1029 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 AQP9O43315 295 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 GNAZP19086 355 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 HK1P19367 917 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 IL15P40933 162 aaPredicted RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 GPR139Q6DWJ6 353 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 COMTD1Q86VU5 262 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 OR4D10Q8NGI6 311 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 IFT43Q96FT9 208 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 USB1Q9BQ65 265 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 DUSP22Q9NRW4 184 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 LIMD1Q9UGP4 676 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 RBM7Q9Y580 266 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 WDR19Q8NEZ3 1342 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 ARHGAP31Q2M1Z3 1444 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 SNRPB2P08579 225 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 OR52Z1P0C646 297 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 CRADDP78560 199 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 KCNH2Q12809 1159 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 DRAP1Q14919 205 aaPredicted RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 TRIM61Q5EBN2 209 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 SGO1Q5FBB7 561 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 TSPAN33Q86UF1 283 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 KAT8Q9H7Z6 458 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 PNMA6EA0A0J9YXQ4 647 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 TRIM38O00635 465 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 PPEF2O14830 753 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 MAGEB4O15481 346 aaPredicted RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 RGS14O43566 566 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 SYN1P17600 705 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 GPD1P21695 349 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 WDR59Q6PJI9 974 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 SLC26A11Q86WA9 606 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 CBR4Q8N4T8 237 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 EXOSC8Q96B26 276 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 SLC41A3Q96GZ6 507 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 GGA3Q9NZ52 723 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 YY2O15391 372 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 UBAP2LQ14157 1087 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 METTL11BQ5VVY1 283 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 SHC3Q92529 594 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF566Q969W8 418 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 APOPT1Q96IL0 206 aa4.79□□□□□ -1.64
NEAT1-202ENST00000501122 PPP1R10Q96QC0 940 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 CDC42EP4Q9H3Q1 356 aaKnown RBP4.79□□□□□ -1.64
NEAT1-202ENST00000501122 UGT2B17O75795 530 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PRAMEF1O95521 474 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 VAMP2P63027 116 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 SLC13A2Q13183 592 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 EXOC2Q96KP1 924 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 EYA3Q99504 573 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 OPA3Q9H6K4 179 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 CASS4Q9NQ75 786 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NPIPA5A0A0B4J1W7 369 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 DCLK1O15075 740 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 CLIC2O15247 247 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NEK3P51956 506 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PPP1R26Q5T8A7 1209 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 UNC5DQ6UXZ4 953 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 FANCBQ8NB91 859 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PLBD2Q8NHP8 589 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 DCSTAMPQ9H295 470 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PCDHA4Q9UN74 947 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PDE10AQ9Y233 779 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 CIDEAO60543 219 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 APRTP07741 180 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 MECP2P51608 486 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 RPP30P78346 268 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 PPP1R3AQ16821 1122 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 BRDTQ58F21 947 aaPredicted RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 FAM46DQ8NEK8 389 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 KLHL5Q96PQ7 755 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 J3QR89 54 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 LRIG2O94898 1065 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 HOXB6P17509 224 aaKnown RBP4.78□□□□□ -1.64
NEAT1-202ENST00000501122 AP1S1P61966 158 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ELP6Q0PNE2 266 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF674Q2M3X9 581 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 ATG4AQ8WYN0 398 aa4.78□□□□□ -1.64
NEAT1-202ENST00000501122 NCSTNQ92542 709 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms