RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ATXN7L3BQ96GX2 97 aa9□□□□□ -0.97
FN1-227ENST00000498719 C5AR2Q9P296 337 aa9□□□□□ -0.97
FN1-227ENST00000498719 CACNG4Q9UBN1 327 aa9□□□□□ -0.97
FN1-227ENST00000498719 DKK3Q9UBP4 350 aa9□□□□□ -0.97
FN1-227ENST00000498719 PDCD11Q14690 1871 aaKnown RBP9□□□□□ -0.97
FN1-227ENST00000498719 A0A0A0MRY4 1105 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 FIGNL2A6NMB9 653 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 E7ENQ6 273 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 KCNK1O00180 336 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 RNF103O00237 685 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 NVLO15381 856 aaKnown RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 MGEA5O60502 916 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ADAMTS4O75173 837 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 USP12O75317 370 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 NEBLO76041 1014 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 PSMG1O95456 288 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SNAI1O95863 264 aaPredicted RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 ERVK-10P10266 1014 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SMPD1P17405 629 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ARRB2P32121 409 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 GNL1P36915 607 aaPredicted RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 MLH1P40692 756 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 NR2C2P49116 596 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 CPT1AP50416 773 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 BCAT1P54687 386 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ARF3P61204 181 aaPredicted RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 ARF1P84077 181 aaKnown RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 SOX4Q06945 474 aaPredicted RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 ADIGQ0VDE8 80 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 STX3Q13277 289 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ADIPOQQ15848 244 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SLC27A1Q6PCB7 646 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 PLEKHM3Q6ZWE6 761 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 TTC39CQ8N584 583 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SLC25A41Q8N5S1 370 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 CCNYQ8ND76 341 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 MTBPQ96DY7 904 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 P2RY11Q96G91 374 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ZNF333Q96JL9 665 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SPATA13Q96N96 652 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 OLFM3Q96PB7 478 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ZBED2Q9BTP6 218 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 HGH1Q9BTY7 390 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 THTPAQ9BU02 230 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 TUBB6Q9BUF5 446 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 KATNBL1Q9H079 304 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ADAMTS10Q9H324 1103 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SYBUQ9NX95 663 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.99□□□□□ -0.97
FN1-227ENST00000498719 ADGRE2Q9UHX3 823 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 FAM234BA2RU67 622 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 KPNA7A9QM74 516 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 GPR32O75388 356 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 AMHP03971 560 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 YBX3P16989 372 aaKnown RBP eCLIP8.99□□□□□ -0.971e-57■□□□□ 10.4
FN1-227ENST00000498719 ACAT1P24752 427 aaKnown RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 ABCG1P45844 678 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 NME3Q13232 169 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 OTUD1Q5VV17 481 aaPredicted RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 SYPL2Q5VXT5 272 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ARHGAP17Q68EM7 881 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 CAPRIN2Q6IMN6 1127 aaKnown RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 TAF2Q6P1X5 1199 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ISLR2Q6UXK2 745 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 PACS1Q6VY07 963 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 CTU1Q7Z7A3 348 aaKnown RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 TMEM145Q8NBT3 493 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 RNF169Q8NCN4 708 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 BEST2Q8NFU1 509 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 STT3BQ8TCJ2 826 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SUSD3Q96L08 255 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 CCDC106Q9BWC9 280 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SHCBP1LQ9BZQ2 653 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 WWP1Q9H0M0 922 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ZCWPW1Q9H0M4 648 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 XPNPEP3Q9NQH7 507 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 STOML1Q9UBI4 398 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 RPL26L1Q9UNX3 145 aaKnown RBP8.99□□□□□ -0.97
FN1-227ENST00000498719 DNAJC16Q9Y2G8 782 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 SNX8Q9Y5X2 465 aa8.99□□□□□ -0.97
FN1-227ENST00000498719 ANKRD34BA5PLL1 514 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 DPPA5A6NC42 116 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 PRKCGP05129 697 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 MMP3P08254 477 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 FGF3P11487 239 aaPredicted RBP8.98□□□□□ -0.97
FN1-227ENST00000498719 ZFXP17010 805 aaPredicted RBP8.98□□□□□ -0.97
FN1-227ENST00000498719 PAMP19021 973 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 VHLP40337 213 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 ARL4AP40617 200 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 TLE2Q04725 743 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 NIPAL4Q0D2K0 466 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 FOXO1Q12778 655 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 EFR3AQ14156 821 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 POLD3Q15054 466 aaPredicted RBP8.98□□□□□ -0.97
FN1-227ENST00000498719 DCAF4L1Q3SXM0 396 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 TEDDM1Q5T9Z0 273 aa8.98□□□□□ -0.97
FN1-227ENST00000498719 VWA5B1Q5TIE3 1220 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms