RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SRLQ86TD4 932 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 UMODL1-AS1Q8N2C9 162 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 PELI3Q8N2H9 469 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 SLC30A5Q8TAD4 765 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 SLC20A1Q8WUM9 679 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 PATE1Q8WXA2 126 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 PDFQ9HBH1 243 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 LRRC4CQ9HCJ2 640 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 OCIAD1Q9NX40 245 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 LRRK1Q38SD2 2015 aa13.95□□□□□ -0.18
CCDC58-207ENST00000498466 ANKRD36A6QL64 1941 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 IGHV1OR21-1A0A087WYE8 117 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 WASH4PA8MWX3 477 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 B4E171 279 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 F8VZ95 297 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 DUX1O43812 170 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 PALMO75781 387 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 UCHL3P15374 230 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 GM2AP17900 193 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 GPD1P21695 349 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 CSF2RBP32927 897 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 TSPAN7P41732 249 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 RGRP47804 291 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 RAB15P59190 212 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 POLR2LP62875 67 aaKnown RBP13.94□□□□□ -0.18
CCDC58-207ENST00000498466 BCL2L1Q07817 233 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 CDC20Q12834 499 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 PEX6Q13608 980 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 LACTB2Q53H82 288 aaPredicted RBP13.94□□□□□ -0.18
CCDC58-207ENST00000498466 AFMIDQ63HM1 303 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 DPPA4Q7L190 304 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 HEATR4Q86WZ0 1026 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 ZNF677Q86XU0 584 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 NLGN4XQ8N0W4 816 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 TSEN2Q8NCE0 465 aaKnown RBP13.94□□□□□ -0.18
CCDC58-207ENST00000498466 NLGN4YQ8NFZ3 816 aaPredicted RBP13.94□□□□□ -0.18
CCDC58-207ENST00000498466 APOBEC4Q8WW27 367 aaKnown RBP13.94□□□□□ -0.18
CCDC58-207ENST00000498466 NUS1Q96E22 293 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 DPYSL5Q9BPU6 564 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 EFHD1Q9BUP0 239 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 SELENOOQ9BVL4 669 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
CCDC58-207ENST00000498466 PHPT1Q9NRX4 125 aaPredicted RBP13.94□□□□□ -0.18
CCDC58-207ENST00000498466 TRNAU1APQ9NX07 287 aaKnown RBP13.94□□□□□ -0.18
CCDC58-207ENST00000498466 KCNK4Q9NYG8 393 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 TMEM9Q9P0T7 183 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 PILRAQ9UKJ1 303 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 SUFUQ9UMX1 484 aa13.94□□□□□ -0.18
CCDC58-207ENST00000498466 PPM1DO15297 605 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 FGF10O15520 208 aaPredicted RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 PRAMEF11O60813 436 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 FUCA1P04066 466 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 CYP1A1P04798 512 aaPredicted RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 CEACAM5P06731 702 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 MAP4P27816 1152 aaKnown RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 RFC1P35251 1148 aaPredicted RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 CSNK1DP48730 415 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 CDR2Q01850 454 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 SEPT6Q14141 434 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 DEFB109BQ30KR1 87 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 MIIPQ5JXC2 388 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 ATCAYQ86WG3 371 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 FAM114A1Q8IWE2 563 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 UNC5BQ8IZJ1 945 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 NAGSQ8N159 534 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 ECHDC3Q96DC8 303 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 AHCYL2Q96HN2 611 aaKnown RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 CELF6Q96J87 481 aaKnown RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 TEFMQ96QE5 360 aaKnown RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 TUBGCP2Q9BSJ2 902 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 CINPQ9BW66 212 aaPredicted RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 STK33Q9BYT3 514 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 LRRC19Q9H756 370 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 KIAA1468Q9P260 1216 aa13.93□□□□□ -0.18
CCDC58-207ENST00000498466 NOCTQ9UK39 431 aaKnown RBP13.93□□□□□ -0.18
CCDC58-207ENST00000498466 LOC101059948A0A1B0GTJ6 334 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 GOLGA6CA6NDK9 693 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 GOLGA6BA6NDN3 693 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 PRR19A6NJB7 356 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 MTSS1O43312 755 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 GFPT2O94808 682 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 GOLGA6DP0CG33 693 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 ERCC5P28715 1186 aaPredicted RBP13.92□□□□□ -0.18
CCDC58-207ENST00000498466 OAS2P29728 719 aaKnown RBP13.92□□□□□ -0.18
CCDC58-207ENST00000498466 CTBSQ01459 385 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 FMO1Q01740 532 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 KLRB1Q12918 225 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 SQSTM1Q13501 440 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 HSP90AA4PQ58FG1 418 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 SNAP47Q5SQN1 464 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 DENND2CQ68D51 928 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 TMEM71Q6P5X7 295 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 WDR59Q6PJI9 974 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 KDELC2Q7Z4H8 507 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 PTCD2Q8WV60 388 aaKnown RBP13.92□□□□□ -0.18
CCDC58-207ENST00000498466 MIB2Q96AX9 1013 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 RTP4Q96DX8 246 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 COQ10AQ96MF6 247 aa13.92□□□□□ -0.18
CCDC58-207ENST00000498466 CTRCQ99895 268 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms