RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SPTLC3Q9NUV7 552 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 SIRPGQ9P1W8 387 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 PADI4Q9UM07 663 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 PCDHB1Q9Y5F3 818 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 DGKBQ9Y6T7 804 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 SCN8AQ9UQD0 1980 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 FREM2Q5SZK8 3169 aa8.49□□□□□ -1.05
HMGXB4-207ENST00000498212 PRSS38A1L453 326 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 LRRD1A4D1F6 860 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 GOLGA6CA6NDK9 693 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 GOLGA6BA6NDN3 693 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 TMEM202A6NGA9 273 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 AKR1B15C9JRZ8 316 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 PDE2AO00408 941 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 TNFRSF10CO14798 259 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 TLX3O43711 291 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 FZD6O60353 706 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 BRINP1O60477 761 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 USP12O75317 370 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 TCEA3O75764 348 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 PDHA1P08559 390 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 HOXC4P09017 264 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 GOLGA6DP0CG33 693 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 MYCLP1P12525 358 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 KRT10P13645 584 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 CCNB1P14635 433 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 CTPS1P17812 591 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 MX2P20592 715 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 CA4P22748 312 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 CES1P23141 567 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 ETV3P41162 512 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 EPHB1P54762 984 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 DSC2Q02487 901 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 ISXQ2M1V0 245 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 KCTD16Q68DU8 428 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 ALG1LQ6GMV1 187 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 LRRC69Q6ZNQ3 347 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 HSD11B1LQ7Z5J1 315 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 PELI3Q8N2H9 469 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 PQLC3Q8N755 202 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 CCNYQ8ND76 341 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 WDR48Q8TAF3 677 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 LRRN4Q8WUT4 740 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 PIH1D2Q8WWB5 315 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 OR1E3Q8WZA6 343 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 RAPGEF5Q92565 580 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 HDAC11Q96DB2 347 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 DTD2Q96FN9 168 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 ZNF830Q96NB3 372 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 TSGA13Q96PP4 275 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 RNF157Q96PX1 679 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 MCCC1Q96RQ3 725 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 RBM15Q96T37 977 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 CCDC3Q9BQI4 270 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 LGR4Q9BXB1 951 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 FGF22Q9HCT0 170 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 MRPL40Q9NQ50 206 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 RBM22Q9NW64 420 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 GOLGA6AQ9NYA3 693 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 GULP1Q9UBP9 304 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 AMACRQ9UHK6 382 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 MOSPD1Q9UJG1 213 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 GPR34Q9UPC5 381 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 PPIL1Q9Y3C6 166 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 TTLL3Q9Y4R7 772 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 RAI2Q9Y5P3 530 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 CFAP47Q6ZTR5 3102 aa8.48□□□□□ -1.05
HMGXB4-207ENST00000498212 URB1O60287 2271 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 A0A0J9YYE9 177 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ZNF487B1APH4 448 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 RRP8O43159 456 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 MTA2O94776 668 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TRBC1P01850 177 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 MPOP05164 745 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 HLA-DQB2P05538 268 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ZNF30P17039 623 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ACTN2P35609 894 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 EIF2S3P41091 472 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ABCG1P45844 678 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 GABREP78334 506 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 GBE1Q04446 702 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 SLC10A2Q12908 348 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 SPIDRQ14159 915 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 PTPRRQ15256 657 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TBC1D25Q3MII6 688 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ODF2Q5BJF6 829 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 RAET1GQ6H3X3 334 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 RBM44Q6ZP01 1051 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 Q6ZVL8 140 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TAF8Q7Z7C8 310 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TSPAN33Q86UF1 283 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 HEATR4Q86WZ0 1026 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 VSIG1Q86XK7 387 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 CCDC13Q8IYE1 715 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 LSMEM2Q8N112 164 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 CBARPQ8N350 705 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 PLD5Q8N7P1 536 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 KYQ8NBH2 561 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 OR6C4Q8NGE1 309 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms