RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 LIPIQ6XZB0 460 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 ARCQ7LC44 396 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 SLC47A2Q86VL8 602 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 FMR1NBQ8N0W7 255 aaPredicted RBP12.66□□□□□ -0.38
TRIM27-207ENST00000498117 NAGSQ8N159 534 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 ESX1Q8N693 406 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 NELFBQ8WX92 580 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 PATE1Q8WXA2 126 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 EXOC2Q96KP1 924 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 TUBGCP5Q96RT8 1024 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 SUDS3Q9H7L9 328 aaPredicted RBP12.66□□□□□ -0.38
TRIM27-207ENST00000498117 PHPT1Q9NRX4 125 aaPredicted RBP12.66□□□□□ -0.38
TRIM27-207ENST00000498117 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
TRIM27-207ENST00000498117 TMEM59LQ9UK28 342 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 SRPK3Q9UPE1 567 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 POLHQ9Y253 713 aa12.66□□□□□ -0.38
TRIM27-207ENST00000498117 MED13Q9UHV7 2174 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 FAM72CH0Y354 149 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 GOLGA8SH3BPF8 625 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 BUB1BO60566 1050 aaPredicted RBP12.65□□□□□ -0.38
TRIM27-207ENST00000498117 RFPL1O75677 317 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 PLEKP08567 350 aaPredicted RBP12.65□□□□□ -0.38
TRIM27-207ENST00000498117 ERCC5P28715 1186 aaPredicted RBP12.65□□□□□ -0.38
TRIM27-207ENST00000498117 CLCN1P35523 988 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 GNPDA1P46926 289 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 YBEYP58557 167 aaPredicted RBP12.65□□□□□ -0.38
TRIM27-207ENST00000498117 MAP7Q14244 749 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 CYTH1Q15438 398 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 SNAP47Q5SQN1 464 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 FAM72AQ5TYM5 149 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 AFMIDQ63HM1 303 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 FAM72DQ6L9T8 149 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 TRNP1Q6NT89 227 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 GBP6Q6ZN66 633 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 MAMDC2Q7Z304 686 aaPredicted RBP12.65□□□□□ -0.38
TRIM27-207ENST00000498117 ARHGAP22Q7Z5H3 698 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 FAM72BQ86X60 149 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 CAMK1DQ8IU85 385 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 HSCBQ8IWL3 235 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 MSANTD4Q8NCY6 345 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 OR10G6Q8NH81 332 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 NOL6Q9H6R4 1146 aaKnown RBP12.65□□□□□ -0.38
TRIM27-207ENST00000498117 LHX3Q9UBR4 397 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 TLK1Q9UKI8 766 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 RPS6KL1Q9Y6S9 549 aa12.65□□□□□ -0.38
TRIM27-207ENST00000498117 SPENQ96T58 3664 aaKnown RBP12.64□□□□□ -0.39
TRIM27-207ENST00000498117 A8MU76 341 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 FOXN3O00409 490 aaPredicted RBP12.64□□□□□ -0.39
TRIM27-207ENST00000498117 POLR1CO15160 346 aaPredicted RBP12.64□□□□□ -0.39
TRIM27-207ENST00000498117 INPP4BO15327 924 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 FGFR1OPO95684 399 aaKnown RBP12.64□□□□□ -0.39
TRIM27-207ENST00000498117 DLGAP3O95886 979 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 FUCA1P04066 466 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 CEACAM5P06731 702 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 RNF224P0DH78 156 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 DCTP40126 519 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 RIPPLY3P57055 190 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
TRIM27-207ENST00000498117 CTBSQ01459 385 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 APBA1Q02410 837 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 RALGDSQ12967 914 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 ERV3-1Q14264 604 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 ACOX1Q15067 660 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 EXOC3L4Q17RC7 722 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 WDR74Q6RFH5 385 aaPredicted RBP12.64□□□□□ -0.39
TRIM27-207ENST00000498117 ZSWIM9Q86XI8 627 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 TICAM1Q8IUC6 712 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 PAF1Q8N7H5 531 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 SLC38A3Q99624 504 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 KLC2Q9H0B6 622 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 KCTD5Q9NXV2 234 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 UBA2Q9UBT2 640 aaPredicted RBP12.64□□□□□ -0.39
TRIM27-207ENST00000498117 SUFUQ9UMX1 484 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 NEU3Q9UQ49 428 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 ATP6V1DQ9Y5K8 247 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 MRPS18BQ9Y676 258 aaKnown RBP12.64□□□□□ -0.39
TRIM27-207ENST00000498117 CELSR2Q9HCU4 2923 aa12.64□□□□□ -0.39
TRIM27-207ENST00000498117 LRBAP50851 2863 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 ANKRD36A6QL64 1941 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 PPP1R3GB7ZBB8 358 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 RASA4BC9J798 803 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 RASA4O43374 803 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 F8A1P23610 371 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 ELAVL4P26378 380 aaKnown RBP12.63□□□□□ -0.39
TRIM27-207ENST00000498117 COL8A1P27658 744 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 TNFRSF8P28908 595 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 SERPINA4P29622 427 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 DLSTP36957 453 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 ADCY8P40145 1251 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 PMS2P54278 862 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 CDO1Q16878 200 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 PARP15Q460N3 678 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 C2CD6Q53TS8 623 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 DPPA4Q7L190 304 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 PELI3Q8N2H9 469 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 EMC1Q8N766 993 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 RTL3Q8N8U3 475 aaKnown RBP12.63□□□□□ -0.39
TRIM27-207ENST00000498117 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 TEX101Q9BY14 249 aa12.63□□□□□ -0.39
TRIM27-207ENST00000498117 FRMD8Q9BZ67 464 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms