RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SPATA4Q8NEY3 305 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 OR4C5Q8NGB2 326 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MDM1Q8TC05 714 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MCOLN3Q8TDD5 553 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DENND1AQ8TEH3 1009 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PIGKQ92643 395 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SYAP1Q96A49 352 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 E2F7Q96AV8 911 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ANKRD9Q96BM1 317 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 FXYD5Q96DB9 178 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CHFRQ96EP1 664 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 KLHL5Q96PQ7 755 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SIN3AQ96ST3 1273 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 LPIN3Q9BQK8 851 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NAA15Q9BXJ9 866 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 BCL2L13Q9BXK5 485 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CLEC4MQ9H2X3 399 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 MMP27Q9H306 513 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 WDR55Q9H6Y2 383 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 PDRG1Q9NUG6 133 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TMEM161AQ9NX61 479 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TAS2R1Q9NYW7 299 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PRKAG2Q9UGJ0 569 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 KIF25Q9UIL4 384 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 STARD13Q9Y3M8 1113 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PCDHGA3Q9Y5H0 932 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TNPO3Q9Y5L0 923 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 FRMPD4Q14CM0 1322 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SBNO2Q9Y2G9 1366 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ASCC3Q8N3C0 2202 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 ACACBO00763 2458 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 ARGFXA6NJG6 315 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TRIM64CA6NLI5 447 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 F8VZ95 297 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 H0Y626 953 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 H0YIV9 168 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 EBAG9O00559 213 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MAN2B1O00754 1011 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 IRS4O14654 1257 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 SLC22A1O15245 554 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 HCRTR1O43613 425 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 BUB3O43684 328 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GATCO43716 136 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 AKAP8O43823 692 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 PEX10O60683 326 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 JTBO76095 146 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SORBS2O94875 1100 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 LARGE1O95461 756 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SEC24AO95486 1093 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PLAUP00749 431 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PDGFRAP16234 1089 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 VDAC1P21796 283 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NME2P22392 152 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 WARSP23381 471 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 EIF4BP23588 611 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 EEF1B2P24534 225 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 CDK2P24941 298 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CHMLP26374 656 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CYP2C18P33260 490 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 RBM34P42696 430 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 CTBP2P56545 445 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 FMO1Q01740 532 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NAAAQ02083 359 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GFPT1Q06210 699 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 RBPJQ06330 500 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 OS9Q13438 667 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 THOC5Q13769 683 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 HNF4GQ14541 408 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SF3B4Q15427 424 aaKnown RBP eCLIP1.45□□□□□ -2.182e-8■■■□□ 15.1
XRN1-214ENST00000498077 SURF1Q15526 300 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TARBP2Q15633 366 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 NAB2Q15742 525 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PRSS53Q2L4Q9 553 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CCNI2Q6ZMN8 369 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 RNF111Q6ZNA4 994 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CCDC80Q76M96 950 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SLC29A4Q7RTT9 530 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 COL23A1Q86Y22 540 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 DHX40Q8IX18 779 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 MINDY1Q8N5J2 469 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 EXD3Q8N9H8 876 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ANKRD53Q8N9V6 530 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 FAM13CQ8NE31 585 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MORC4Q8TE76 937 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SMARCE1Q969G3 411 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DUS3LQ96G46 650 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 RPGRIP1Q96KN7 1286 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MAGEB10Q96LZ2 347 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 MGLLQ99685 303 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CHID1Q9BWS9 393 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SLC12A9Q9BXP2 914 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DPH1Q9BZG8 443 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CDH19Q9H159 772 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 BCO1Q9HAY6 547 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 UBN1Q9NPG3 1134 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.45□□□□□ -2.18
XRN1-214ENST00000498077 PLSCR3Q9NRY6 295 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 XPO7Q9UIA9 1087 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 ADAM30Q9UKF2 790 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms