RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 NOXA1Q86UR1 476 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 ZNF34Q8IZ26 560 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 NKAPQ8N5F7 415 aaKnown RBP3.71□□□□□ -1.82
SMC4-227ENST00000497984 TMEM57Q8N5G2 664 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 CNBD1Q8NA66 436 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 SPATA5Q8NB90 893 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 OR10V1Q8NGI7 309 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 PPM1EQ8WY54 764 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 SH3KBP1Q96B97 665 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 ZC3HAV1LQ96H79 300 aaKnown RBP3.71□□□□□ -1.82
SMC4-227ENST00000497984 MXRA8Q9BRK3 442 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 LRRC1Q9BTT6 524 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 ISCA1Q9BUE6 129 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 KCNN2Q9H2S1 579 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 DNAJC16Q9Y2G8 782 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 GDAQ9Y2T3 454 aa3.71□□□□□ -1.82
SMC4-227ENST00000497984 NR1D1P20393 614 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 EIF2S3P41091 472 aaKnown RBP3.7□□□□□ -1.82
SMC4-227ENST00000497984 TRAPPC10P48553 1259 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 CLCNKAP51800 687 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 ARL4CP56559 192 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 YWHAZP63104 245 aaKnown RBP3.7□□□□□ -1.82
SMC4-227ENST00000497984 SLC1A5Q15758 541 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 LPAL2Q16609 132 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 ANO1Q5XXA6 986 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 TRNP1Q6NT89 227 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 KCTD8Q6ZWB6 473 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 NOTCH2NLQ7Z3S9 236 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 MOGAT3Q86VF5 341 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 KIAA2013Q8IYS2 634 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 USP38Q8NB14 1042 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 SCCPDHQ8NBX0 429 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 ADAD2Q8NCV1 583 aaKnown RBP3.7□□□□□ -1.82
SMC4-227ENST00000497984 CCT6BQ92526 530 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 ZNF599Q96NL3 588 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 FAM167BQ9BTA0 163 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 STN1Q9H668 368 aaKnown RBP3.7□□□□□ -1.82
SMC4-227ENST00000497984 EPHX3Q9H6B9 360 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 MKKSQ9NPJ1 570 aaPredicted RBP3.7□□□□□ -1.82
SMC4-227ENST00000497984 PADI1Q9ULC6 663 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 RIPOR2Q9Y4F9 1068 aa3.7□□□□□ -1.82
SMC4-227ENST00000497984 CRLF1O75462 422 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 SLC2A4P14672 509 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 MYOD1P15172 320 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 EDN2P20800 178 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 PAPOLAP51003 745 aaKnown RBP3.69□□□□□ -1.82
SMC4-227ENST00000497984 CHRNDQ07001 517 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 ITGADQ13349 1161 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 GRAMD1BQ3KR37 738 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 CCNYL2Q5T2Q4 361 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 SLC35E4Q6ICL7 350 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 LRRC8EQ6NSJ5 796 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 RGMBQ6NW40 437 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 CEACAM20Q6UY09 585 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.69□□□□□ -1.82
SMC4-227ENST00000497984 AMDHD2Q9Y303 409 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 STON1Q9Y6Q2 735 aa3.69□□□□□ -1.82
SMC4-227ENST00000497984 GOLGA6L9A6NEM1 432 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 KRTAP16-1A8MUX0 517 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 DVL1O14640 695 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 CNPP09543 421 aaKnown RBP3.68□□□□□ -1.82
SMC4-227ENST00000497984 G6PDP11413 515 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 ETFAP13804 333 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 AGAP20933 346 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 DCTP40126 519 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 DVL1P1P54792 670 aaPredicted RBP3.68□□□□□ -1.82
SMC4-227ENST00000497984 HNRNPH2P55795 449 aaKnown RBP3.68□□□□□ -1.82
SMC4-227ENST00000497984 ANKRD1Q15327 319 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 EIF2S3LQ2VIR3 472 aaKnown RBP3.68□□□□□ -1.82
SMC4-227ENST00000497984 FBXO47Q5MNV8 452 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 SLC36A4Q6YBV0 504 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 TAOK1Q7L7X3 1001 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 HERC6Q8IVU3 1022 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 FTSJ3Q8IY81 847 aaKnown RBP3.68□□□□□ -1.82
SMC4-227ENST00000497984 RNF113BQ8IZP6 322 aaKnown RBP3.68□□□□□ -1.82
SMC4-227ENST00000497984 DSELQ8IZU8 1212 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 ZNF248Q8NDW4 579 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 OR2AK2Q8NG84 335 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 AFG1LQ8WV93 481 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 RILPL2Q969X0 211 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 ARPC5LQ9BPX5 153 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 FKRPQ9H9S5 495 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 NOD2Q9HC29 1040 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 FAM118AQ9NWS6 357 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 TMEM160Q9NX00 188 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 FEM1BQ9UK73 627 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 RCOR1Q9UKL0 485 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 SUFUQ9UMX1 484 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 CARD8Q9Y2G2 431 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 KCNK7Q9Y2U2 307 aa3.68□□□□□ -1.82
SMC4-227ENST00000497984 RRP7AQ9Y3A4 280 aaKnown RBP3.68□□□□□ -1.82
SMC4-227ENST00000497984 SMCHD1A6NHR9 2005 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 SH2D7A6NKC9 451 aaPredicted RBP3.67□□□□□ -1.82
SMC4-227ENST00000497984 B9A039 149 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 BLOC1S5-TXNDC5H3BN57 136 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 ANP32CO43423 234 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 TSPAN3O60637 253 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 MMP2P08253 660 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 INHBAP08476 426 aa3.67□□□□□ -1.82
SMC4-227ENST00000497984 CYC1P08574 325 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms