RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 RCOR1Q9UKL0 485 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 GPR34Q9UPC5 381 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 DYTNA2CJ06 578 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 FAM90A10PA6NDY2 464 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 AKR1B15C9JRZ8 316 aaPredicted RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 VILLO15195 856 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 SLC25A12O75746 678 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 OAZ2O95190 189 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 OR2C1O95371 312 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 BMP15O95972 392 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 CYC1P08574 325 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 HOXC6P09630 235 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 BDNFP23560 247 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 CDC25AP30304 524 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 HNRNPH1P31943 449 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 RPL3P39023 403 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 METAP2P50579 478 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS36-206ENST00000497149 DSC1Q08554 894 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 TDRD12Q587J7 1177 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 GKAP1Q5VSY0 366 aaPredicted RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 TYW3Q6IPR3 259 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 METTL2BQ6P1Q9 378 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 B3GNT6Q6ZMB0 384 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 GLDNQ6ZMI3 551 aaPredicted RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 SPATA6LQ8N4H0 392 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 OR14L1PQ8NHC6 308 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 ADAMTS14Q8WXS8 1223 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 METTL2AQ96IZ6 378 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 C1orf74Q96LT6 269 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 IFIH1Q9BYX4 1025 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 NDST4Q9H3R1 872 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 SH2D4AQ9H788 454 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 HINT3Q9NQE9 182 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 AGO1Q9UL18 857 aaKnown RBP4.87□□□□□ -1.63
VPS36-206ENST00000497149 MTMR6Q9Y217 621 aa4.87□□□□□ -1.63
VPS36-206ENST00000497149 SCAMP1O15126 338 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 HCRTR2O43614 444 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 ZIC3O60481 467 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 NDUFS3O75489 264 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 FTCDO95954 541 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 ALOX12P18054 663 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 MAOAP21397 527 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 EIF2S3P41091 472 aaKnown RBP4.86□□□□□ -1.63
VPS36-206ENST00000497149 UBA7P41226 1012 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 CLCN3P51790 818 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 RAD23BP54727 409 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 LINC00205P59089 165 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 PDE1CQ14123 709 aaPredicted RBP4.86□□□□□ -1.63
VPS36-206ENST00000497149 EFNB3Q15768 340 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 TMEM154Q6P9G4 183 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 PQLC2Q6ZP29 291 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 ZC3HC1Q86WB0 502 aaKnown RBP4.86□□□□□ -1.63
VPS36-206ENST00000497149 RPAP2Q8IXW5 612 aaPredicted RBP4.86□□□□□ -1.63
VPS36-206ENST00000497149 OR14A16Q8NHC5 309 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 ZKSCAN4Q969J2 545 aaPredicted RBP4.86□□□□□ -1.63
VPS36-206ENST00000497149 IGSF8Q969P0 613 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 TXNDC15Q96J42 360 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 HARBI1Q96MB7 349 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 SLC25A33Q9BSK2 321 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 MMTAG2Q9BU76 263 aaKnown RBP4.86□□□□□ -1.63
VPS36-206ENST00000497149 MRPL44Q9H9J2 332 aaKnown RBP4.86□□□□□ -1.63
VPS36-206ENST00000497149 TBC1D29Q9UFV1 150 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 VPS28Q9UK41 221 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 MYO6Q9UM54 1294 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 PCDHA7Q9UN72 937 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 CDC14AQ9UNH5 594 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 MAU2Q9Y6X3 613 aa4.86□□□□□ -1.63
VPS36-206ENST00000497149 A8MZ25 164 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 BTBD18B2RXH4 712 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 JRKO75564 520 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 CH25HO95992 272 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 GLUD1P00367 558 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 G6PDP11413 515 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 DDX5P17844 614 aaKnown RBP4.85□□□□□ -1.63
VPS36-206ENST00000497149 HOXA11P31270 313 aaPredicted RBP4.85□□□□□ -1.63
VPS36-206ENST00000497149 GLUD2P49448 558 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 PCYT1AP49585 367 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 CDH8P55286 799 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 CREB5Q02930 508 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 CRYZQ08257 329 aaKnown RBP4.85□□□□□ -1.63
VPS36-206ENST00000497149 NAB2Q15742 525 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 ADIPOQQ15848 244 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 CDONQ4KMG0 1287 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 PPP6R3Q5H9R7 873 aaPredicted RBP4.85□□□□□ -1.63
VPS36-206ENST00000497149 GGNBP1Q5YKI7 109 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 SIGIRRQ6IA17 410 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 JADE1Q6IE81 842 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 BRINP3Q76B58 766 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 CHST9Q7L1S5 443 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 ADGRF2Q8IZF7 708 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 NSUN4Q96CB9 384 aaKnown RBP4.85□□□□□ -1.63
VPS36-206ENST00000497149 SEPT5Q99719 369 aaPredicted RBP4.85□□□□□ -1.63
VPS36-206ENST00000497149 SH3GL2Q99962 352 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 HAUS8Q9BT25 410 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 SMARCAD1Q9H4L7 1026 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 WDR26Q9H7D7 661 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 PPP1R3EQ9H7J1 279 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 SWAP70Q9UH65 585 aa4.85□□□□□ -1.63
VPS36-206ENST00000497149 ZNF215Q9UL58 517 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms