RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 INTS10Q9NVR2 710 aaKnown RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 NDE1Q9NXR1 346 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 AGO1Q9UL18 857 aaKnown RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 G3BP2Q9UN86 482 aaKnown RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 TBC1D30Q9Y2I9 924 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 SPO11Q9Y5K1 396 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 CBX4O00257 560 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 SKAP2O75563 359 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 CD1DP15813 335 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF37AP17032 561 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 CES1P23141 567 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 PMLP29590 882 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 CYLC2Q14093 348 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 TAF1AQ15573 450 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 PPM1LQ5SGD2 360 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 TMEM198Q66K66 360 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 TRIM68Q6AZZ1 485 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 C16orf89Q6UX73 402 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ANKRD33Q7Z3H0 272 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ISCA2Q86U28 154 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 FBXW8Q8N3Y1 598 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 CDKN2AIPNLQ96HQ2 116 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 NSMCE3Q96MG7 304 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 TRMOQ9BU70 441 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 KLF16Q9BXK1 252 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 MUC3BQ9H195 1237 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 GSTO2Q9H4Y5 243 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 ZBTB26Q9HCK0 441 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 TRPC7Q9HCX4 862 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 BATF3Q9NR55 127 aa13.06□□□□□ -0.32
GARNL3-220ENST00000496711 PRPF19Q9UMS4 504 aaKnown RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 MTF2Q9Y483 593 aaPredicted RBP13.06□□□□□ -0.32
GARNL3-220ENST00000496711 C2orf78A6NCI8 922 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 MAP3K7O43318 606 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 TSPAN3O60637 253 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 SMIM24O75264 130 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 IMPDH1P20839 514 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 ERFP50548 548 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 MTTPP55157 894 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 TIAL1Q01085 375 aaKnown RBP eCLIP13.05□□□□□ -0.32
GARNL3-220ENST00000496711 DSG1Q02413 1049 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 CYTH1Q15438 398 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
GARNL3-220ENST00000496711 RNF219Q5W0B1 726 aaPredicted RBP13.05□□□□□ -0.32
GARNL3-220ENST00000496711 CXorf57Q6NSI4 855 aaKnown RBP13.05□□□□□ -0.32
GARNL3-220ENST00000496711 C16orf59Q7L2K0 433 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 HERC6Q8IVU3 1022 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 CEP70Q8NHQ1 597 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 SH3RF2Q8TEC5 729 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 PTERQ96BW5 349 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 CCDC124Q96CT7 223 aaKnown RBP13.05□□□□□ -0.32
GARNL3-220ENST00000496711 PHF21BQ96EK2 531 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 MARK4Q96L34 752 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 AARSD1Q9BTE6 412 aaKnown RBP13.05□□□□□ -0.32
GARNL3-220ENST00000496711 HERC2P3Q9BVR0 1158 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 RNF38Q9H0F5 515 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 MEAF6Q9HAF1 191 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 MRGBPQ9NV56 204 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 OGDHLQ9ULD0 1010 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 FIS1Q9Y3D6 152 aa13.05□□□□□ -0.32
GARNL3-220ENST00000496711 COPG1Q9Y678 874 aaKnown RBP13.05□□□□□ -0.32
GARNL3-220ENST00000496711 AIM2O14862 343 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 CDC25CP30307 473 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 PPP3CCP48454 512 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 ARF5P84085 180 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
GARNL3-220ENST00000496711 CCNIQ14094 377 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 IKBKEQ14164 716 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF678Q5SXM1 525 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF783Q6ZMS7 281 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 HPS6Q86YV9 775 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 PELI3Q8N2H9 469 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 KYQ8NBH2 561 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 LPCAT1Q8NF37 534 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 WBP2Q969T9 261 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 TMEM169Q96HH4 297 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 YY1AP1Q9H869 796 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 S100A14Q9HCY8 104 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 POLR3BQ9NW08 1133 aaPredicted RBP13.04□□□□□ -0.32
GARNL3-220ENST00000496711 PPM1HQ9ULR3 514 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 POMPQ9Y244 141 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 ZNF106Q9H2Y7 1883 aaKnown RBP13.04□□□□□ -0.32
GARNL3-220ENST00000496711 SCN8AQ9UQD0 1980 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 UBA6A0AVT1 1052 aaPredicted RBP13.04□□□□□ -0.32
GARNL3-220ENST00000496711 C2orf81A6NN90 581 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 SORBS2O94875 1100 aaKnown RBP13.04□□□□□ -0.32
GARNL3-220ENST00000496711 LATS1O95835 1130 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 PRLP01236 227 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 CD1EP15812 388 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 PSMA3P25788 255 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 INHBCP55103 352 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 HERVK_113P63132 956 aa13.04□□□□□ -0.32
GARNL3-220ENST00000496711 TCHHL1Q5QJ38 904 aaPredicted RBP13.04□□□□□ -0.32
GARNL3-220ENST00000496711 RPS27LQ71UM5 84 aaKnown RBP13.04□□□□□ -0.32
GARNL3-220ENST00000496711 ADGRG6Q86SQ4 1221 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms