RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CCDC13Q8IYE1 715 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 SCML4Q8N228 414 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 PARP16Q8N5Y8 322 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 NOC3LQ8WTT2 800 aaKnown RBP3.84□□□□□ -1.79
CLK1-214ENST00000496205 INPP5DQ92835 1189 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 FAM149B1Q96BN6 582 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 RNF183Q96D59 192 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 ELMOD3Q96FG2 381 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 TTC14Q96N46 770 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 SLITRK1Q96PX8 696 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 SIN3AQ96ST3 1273 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 WDR77Q9BQA1 342 aaPredicted RBP3.84□□□□□ -1.79
CLK1-214ENST00000496205 H2AFJQ9BTM1 129 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 TUBB6Q9BUF5 446 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 PDZD7Q9H5P4 517 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 KAT14Q9H8E8 782 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 MAGEE1Q9HCI5 957 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 ASAH2Q9NR71 780 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 EHD2Q9NZN4 543 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 PCDHA12Q9UN75 941 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 TTLL3Q9Y4R7 772 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 ZNF335Q9H4Z2 1342 aaPredicted RBP3.84□□□□□ -1.79
CLK1-214ENST00000496205 A0A096LPK6 155 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 FAM237AA0A1B0GTK4 181 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 C17orf102A2RUQ5 167 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 MYO1GB0I1T2 1018 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 EIF3CLB5ME19 914 aaKnown RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 I6L893 689 aaPredicted RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 P4HA2O15460 535 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 LDB2O43679 373 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 ENTPD3O75355 529 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 ERAL1O75616 437 aaKnown RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 BEST1O76090 585 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 RGS11O94810 467 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 ETFAP13804 333 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 CDH2P19022 906 aaPredicted RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 THPOP40225 353 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 RFX5P48382 616 aaPredicted RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 SELENOVP59797 346 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 NIPAL4Q0D2K0 466 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 CCDC96Q2M329 555 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 PLEKHO1Q53GL0 409 aaPredicted RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 ANKRD54Q6NXT1 300 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 TMC8Q8IU68 726 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 DENND6AQ8IWF6 608 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 ZDHHC23Q8IYP9 409 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 ADGRF2Q8IZF7 708 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 RBFAQ8N0V3 343 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 C17orf53Q8N3J3 647 aaPredicted RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 ZBTB2Q8N680 514 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 SLC44A5Q8NCS7 719 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 HUS1BQ8NHY5 278 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 NEK9Q8TD19 979 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 NUDCD2Q8WVJ2 157 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 SMARCE1Q969G3 411 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 ERGIC1Q969X5 290 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 TMEM18Q96B42 140 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 CALML4Q96GE6 196 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 ZC3HAV1LQ96H79 300 aaKnown RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 SETD4Q9NVD3 440 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 SELENONQ9NZV5 590 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 FBXL17Q9UF56 701 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 RPS6KA6Q9UK32 745 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 NOL7Q9UMY1 257 aaKnown RBP3.83□□□□□ -1.8
CLK1-214ENST00000496205 SNX8Q9Y5X2 465 aa3.83□□□□□ -1.8
CLK1-214ENST00000496205 TMEM272A0A1B0GTI8 110 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 A0A1W2PRG0 241 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 TYW5A2RUC4 315 aaKnown RBP3.82□□□□□ -1.8
CLK1-214ENST00000496205 MDM4O15151 490 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 PRPF4O43172 522 aaKnown RBP eCLIP3.82□□□□□ -1.8
CLK1-214ENST00000496205 ADAM20O43506 726 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 HNRNPCL1O60812 293 aaKnown RBP3.82□□□□□ -1.8
CLK1-214ENST00000496205 STARD3NLO95772 234 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 SYF2O95926 243 aaKnown RBP3.82□□□□□ -1.8
CLK1-214ENST00000496205 FTCDO95954 541 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 CLTBP09497 229 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 SELLP14151 372 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 CHRNB2P17787 502 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 CDC25AP30304 524 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 GCH1P30793 250 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 HOXA11P31270 313 aaPredicted RBP3.82□□□□□ -1.8
CLK1-214ENST00000496205 KRT20P35900 424 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 AVPR1AP37288 418 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 GPR12P47775 334 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 GABRB2P47870 512 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 PGGT1BP53609 377 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 TRAF1Q13077 416 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 CHAF1BQ13112 559 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 OLIG2Q13516 323 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 MYBPC2Q14324 1141 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 ZNF284Q2VY69 593 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 RAB41Q5JT25 222 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 JADE1Q6IE81 842 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 HEPHL1Q6MZM0 1159 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 CPLX2Q6PUV4 134 aaKnown RBP3.82□□□□□ -1.8
CLK1-214ENST00000496205 CFAP77Q6ZQR2 320 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 TRILQ7L0X0 811 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 ZNF329Q86UD4 541 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 CCDC105Q8IYK2 499 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 FAM185AQ8N0U4 392 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms