RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CFAP69A5D8W1 941 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 LMO7DNF2Z398 122 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 AGRPO00253 132 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 TPP1O14773 563 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 FZD6O60353 706 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 BRINP1O60477 761 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 CSO75390 466 aaKnown RBP10.62□□□□□ -0.71
NELFE-213ENST00000494956 RASGRP1O95267 797 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 PRLP01236 227 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 TNFP01375 233 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 KRT1P04264 644 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 MPOP05164 745 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 MMP2P08253 660 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 CDK4P11802 303 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 CCNB1P14635 433 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 COMTP21964 271 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 CCNCP24863 283 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 ITPKBP27987 946 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 HTR1BP28222 390 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 MAN1A1P33908 653 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 TRIM23P36406 574 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 POLD2P49005 469 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 PEX5P50542 639 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 E2F1Q01094 437 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 NR0B2Q15466 257 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 LRRC66Q68CR7 880 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 ESRP1Q6NXG1 681 aaKnown RBP10.62□□□□□ -0.71
NELFE-213ENST00000494956 MFSD7Q6UXD7 560 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 TRIM74Q86UV6 250 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 MAP7D3Q8IWC1 876 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 CBARPQ8N350 705 aaPredicted RBP10.62□□□□□ -0.71
NELFE-213ENST00000494956 CNTD1Q8N815 330 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 OR56A4Q8NGH8 313 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 AGAP2Q99490 1192 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 POLR1EQ9GZS1 481 aaKnown RBP10.62□□□□□ -0.71
NELFE-213ENST00000494956 BRD8Q9H0E9 1235 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 TMEM168Q9H0V1 697 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 ABCG4Q9H172 646 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 SYNDIG1Q9H7V2 258 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 CYP4F12Q9HCS2 524 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 DKK4Q9UBT3 224 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 PADI4Q9UM07 663 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 GPR34Q9UPC5 381 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 LHX6Q9UPM6 363 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 DOLKQ9UPQ8 538 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 ACACAQ13085 2346 aa10.62□□□□□ -0.71
NELFE-213ENST00000494956 PKD1L2Q7Z442 2459 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 CACNB4O00305 520 aaPredicted RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 TOR1BO14657 336 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 USP12O75317 370 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 MTA2O94776 668 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 CLDN7O95471 211 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 JCHAINP01591 159 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 CYP2A6P11509 494 aaPredicted RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 KRT10P13645 584 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 HOXB3P14651 431 aaPredicted RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 CD86P42081 329 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 NOP2P46087 812 aaKnown RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 MARCKSL1P49006 195 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 DUSP3P51452 185 aaPredicted RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 KIAA1024LP59773 190 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 PTSQ03393 145 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 ADCY2Q08462 1091 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 ARHGEF7Q14155 803 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 ELOCQ15369 112 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 ALG1LQ6GMV1 187 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 TIGD7Q6NT04 549 aaPredicted RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 DOK6Q6PKX4 331 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 SARM1Q6SZW1 724 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 KDELC2Q7Z4H8 507 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 TECPR1Q7Z6L1 1165 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 TAF8Q7Z7C8 310 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 HEATR4Q86WZ0 1026 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 GAS2L3Q86XJ1 694 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 RFX6Q8HWS3 928 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 CNGA4Q8IV77 575 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 CCDC13Q8IYE1 715 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 LPCAT1Q8NF37 534 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 TPCN2Q8NHX9 752 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 SCAMP4Q969E2 229 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 CCDC74AQ96AQ1 378 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 HDAC11Q96DB2 347 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 NXPE2Q96DL1 559 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 DTD2Q96FN9 168 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 SCRN2Q96FV2 425 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 TSGA13Q96PP4 275 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 MCCC1Q96RQ3 725 aaPredicted RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 RBM15Q96T37 977 aaKnown RBP eCLIP10.61□□□□□ -0.71
NELFE-213ENST00000494956 CCDC3Q9BQI4 270 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 TDRD1Q9BXT4 1180 aaKnown RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 NRSN2Q9GZP1 204 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 WDR26Q9H7D7 661 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 SEPT10Q9P0V9 454 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 SAE1Q9UBE0 346 aaPredicted RBP10.61□□□□□ -0.71
NELFE-213ENST00000494956 PLEKHM1Q9Y4G2 1056 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 ST14Q9Y5Y6 855 aa10.61□□□□□ -0.71
NELFE-213ENST00000494956 ZFC3H1O60293 1989 aaKnown RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 A0A0J9YYE9 177 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 PRSS38A1L453 326 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 RCCD1A6NED2 376 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms