RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 IGF2-ASQ6U949 168 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 HEATR4Q86WZ0 1026 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 NRROSQ86YC3 692 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 CBARPQ8N350 705 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-208ENST00000494728 ZNF248Q8NDW4 579 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 OR56A4Q8NGH8 313 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 NUS1Q96E22 293 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 DTD2Q96FN9 168 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 FOXP3Q9BZS1 431 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 WDR26Q9H7D7 661 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 SUDS3Q9H7L9 328 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-208ENST00000494728 MYO18BQ8IUG5 2567 aa11.66□□□□□ -0.54
VTI1A-208ENST00000494728 FLNCQ14315 2725 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 PRSS38A1L453 326 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 CDRT15L2A8MXV6 281 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 B4DGG1 531 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 AGRPO00253 132 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 CACNB4O00305 520 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 FZD6O60353 706 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 PGLSO95336 258 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 SOD1P00441 154 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 RPLP0P05388 317 aaKnown RBP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 HGFP14210 728 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 MMP13P45452 471 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 RPIAP49247 311 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 ERVPABLB-1P60509 514 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 CXADRP78310 365 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 SPIDRQ14159 915 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 PNCKQ6P2M8 343 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 ALKBH5Q6P6C2 394 aaKnown RBP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 FOXR1Q6PIV2 292 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 PAF1Q8N7H5 531 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 ZNF564Q8TBZ8 553 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 PIH1D2Q8WWB5 315 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 GLMNQ92990 594 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 SLC46A1Q96NT5 459 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 MCCC1Q96RQ3 725 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 UBL7Q96S82 380 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 XPO4Q9C0E2 1151 aaKnown RBP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 CYP4F12Q9HCS2 524 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 NT5MQ9NPB1 228 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 IP6K2Q9UHH9 426 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 CD84Q9UIB8 345 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 ATXN7L1Q9ULK2 861 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-208ENST00000494728 DOLKQ9UPQ8 538 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 PCDHGA8Q9Y5G5 932 aa11.65□□□□□ -0.54
VTI1A-208ENST00000494728 ZNF106Q9H2Y7 1883 aaKnown RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 TNFP01375 233 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 CEACAM5P06731 702 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 MYCLP1P12525 358 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 AK4P27144 223 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 HSPA9P38646 679 aaKnown RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 GARSP41250 739 aaKnown RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 POLD2P49005 469 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 RENBPP51606 427 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 MAZP56270 477 aaKnown RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 POLR2LP62875 67 aaKnown RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 CDK3Q00526 305 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 DSC2Q02487 901 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 GBE1Q04446 702 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 GALNT2Q10471 571 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 HLTFQ14527 1009 aaKnown RBP eCLIP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 KRT81Q14533 505 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 ZSCAN23Q3MJ62 389 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 CCDC122Q5T0U0 273 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 CERCAMQ5T4B2 595 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 SPECC1LQ69YQ0 1117 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 LVRNQ6Q4G3 990 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 Q6ZVL8 140 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 SPRED1Q7Z699 444 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 TAF8Q7Z7C8 310 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 TRIM74Q86UV6 250 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 GKN2Q86XP6 184 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 TEX26Q8N6G2 289 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 PQLC3Q8N755 202 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 FAM46DQ8NEK8 389 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 TPCN2Q8NHX9 752 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 KCNE4Q8WWG9 221 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 PATE1Q8WXA2 126 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 MAML1Q92585 1016 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 AGAP2Q99490 1192 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 SEMA3CQ99985 751 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 TEX101Q9BY14 249 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 FRMD8Q9BZ67 464 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 EPB41L5Q9HCM4 733 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 THSD1Q9NS62 852 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 SPATS2LQ9NUQ6 558 aaKnown RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 MOSPD1Q9UJG1 213 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 LUC7L2Q9Y383 392 aaKnown RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 PLEKHM1Q9Y4G2 1056 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 PCYT1BQ9Y5K3 369 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
VTI1A-208ENST00000494728 RNF215Q9Y6U7 377 aa11.64□□□□□ -0.55
VTI1A-208ENST00000494728 CCDC187A0A096LP49 1063 aa11.63□□□□□ -0.55
VTI1A-208ENST00000494728 ATXN7O15265 892 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms