RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ARNTP27540 789 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 ARCN1P48444 511 aaKnown RBP11.41□□□□□ -0.58
MCF2L-231ENST00000494043 EIF3BP55884 814 aaKnown RBP11.41□□□□□ -0.58
MCF2L-231ENST00000494043 SEMG2Q02383 582 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 ZBTB16Q05516 673 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 MGAT5Q09328 741 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 ELP6Q0PNE2 266 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 CNTN1Q12860 1018 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 RALGDSQ12967 914 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 STAT4Q14765 748 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 EFTUD2Q15029 972 aaKnown RBP eCLIP11.41□□□□□ -0.58
MCF2L-231ENST00000494043 CRY1Q16526 586 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 KLHL38Q2WGJ6 581 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 TJAP1Q5JTD0 557 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 PIP5KL1Q5T9C9 394 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 PDPK2PQ6A1A2 396 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 TRIM67Q6ZTA4 783 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 RASSF3Q86WH2 238 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 TMPRSS6Q8IU80 811 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 UNC5BQ8IZJ1 945 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 PJA1Q8NG27 643 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 OR4K2Q8NGD2 314 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 RAB7BQ96AH8 199 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 PBXIP1Q96AQ6 731 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 EID2BQ96D98 161 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 CYTH2Q99418 400 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 C19orf43Q9BQ61 176 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 CCDC77Q9BR77 488 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 OSBPL6Q9BZF3 934 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 SLC6A17Q9H1V8 727 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 C20orf96Q9NUD7 363 aaPredicted RBP11.41□□□□□ -0.58
MCF2L-231ENST00000494043 IL17CQ9P0M4 197 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 SCML1Q9UN30 329 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 ITM2BQ9Y287 266 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 PKP3Q9Y446 797 aa11.41□□□□□ -0.58
MCF2L-231ENST00000494043 EXOC1LA0A1B0GW35 172 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 TCRBV21S2A2A0A5A6 115 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 A8MX80 341 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 CCL22O00626 93 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 SLC7A4O43246 635 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 ATP8B1O43520 1251 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 TCEA3O75764 348 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 VAPBO95292 243 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 DNTTP04053 509 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 IVLP07476 585 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 C1SP09871 688 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 ERVK-10P10266 1014 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 NDUFV2P19404 249 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 ARSDP51689 593 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 DGKEP52429 567 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 STC1P52823 247 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 TMPRSS15P98073 1019 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 PTSQ03393 145 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 ZNF844Q08AG5 666 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 IFFO1Q0D2I5 559 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 CCDC15Q0P6D6 951 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 ARHGEF7Q14155 803 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 GAS6Q14393 721 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 PTPRCAPQ14761 206 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 KBTBD12Q3ZCT8 623 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 TTC31Q49AM3 519 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-231ENST00000494043 AGBL4Q5VU57 503 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 SYT13Q7L8C5 426 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 KCNMB4Q86W47 210 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 HDDC3Q8N4P3 179 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 HDAC10Q969S8 669 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 FAM131CQ96AQ9 280 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 CLDN23Q96B33 292 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 SIPA1Q96FS4 1042 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 MRGPRX1Q96LB2 322 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 TBATAQ96M53 351 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 TMEM109Q9BVC6 243 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 CHRDQ9H2X0 955 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 MFSD1Q9H3U5 465 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 BPIFA1Q9NP55 256 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 POLMQ9NP87 494 aaPredicted RBP11.4□□□□□ -0.58
MCF2L-231ENST00000494043 PPANQ9NQ55 473 aaKnown RBP11.4□□□□□ -0.58
MCF2L-231ENST00000494043 SMYD2Q9NRG4 433 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 IL1RAPL1Q9NZN1 696 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 SERGEFQ9UGK8 458 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 GGT7Q9UJ14 662 aa11.4□□□□□ -0.58
MCF2L-231ENST00000494043 A0A1W2PP55 124 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 CCDC162PA2VCL2 907 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 CXorf49A8MYA2 514 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 H0Y858 1186 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 STK25O00506 426 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 AP1G1O43747 822 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 RNASEH2AO75792 299 aaKnown RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 PIAS1O75925 651 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 ELFN1P0C7U0 828 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 HADHAP40939 763 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 RPS9P46781 194 aaKnown RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 PRAMEP78395 509 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 SIGLEC14Q08ET2 396 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 SFSWAPQ12872 951 aaKnown RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 NAB1Q13506 487 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 THOC5Q13769 683 aaKnown RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 SMAD1Q15797 465 aaKnown RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 TMEM52BQ4KMG9 183 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 AFTPHQ6ULP2 937 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms