RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 PDHA1P08559 390 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 ALPIP09923 528 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 GOLGA6DP0CG33 693 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PLA2G2AP14555 144 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PTPN3P26045 913 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 IGFALSP35858 605 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 TNNT3P45378 269 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 RABIFP47224 123 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 EIF3EP60228 445 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PDE1CQ14123 709 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PRKD1Q15139 912 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PTPRRQ15256 657 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 IRF4Q15306 451 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PCSK7Q16549 785 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 TEX44Q53QW1 395 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 SEL1L2Q5TEA6 688 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 LIPIQ6XZB0 460 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 KYAT3Q6YP21 454 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PID1Q7Z2X4 250 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 SPATS2Q86XZ4 545 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 CDKL3Q8IVW4 592 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 OXR1Q8N573 874 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 DENND6BQ8NEG7 585 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 ARRDC2Q8TBH0 407 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 ACTL9Q8TC94 416 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 RHBDD1Q8TEB9 315 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 ASB12Q8WXK4 309 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 BMFQ96LC9 184 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 QKIQ96PU8 341 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 LENG8Q96PV6 779 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 HERPUD2Q9BSE4 406 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 C10orf88Q9H8K7 445 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PCDH9Q9HC56 1237 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 MBNL1Q9NR56 388 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 DNAJC28Q9NX36 388 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 GOLGA6AQ9NYA3 693 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 UBP1Q9NZI7 540 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 PPP2R2CQ9Y2T4 447 aa10.44□□□□□ -0.74
TRAPPC12-222ENST00000493792 NAV2Q8IVL1 2488 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 A0A0U1RQS6 177 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 A0A1B0GTQ1 180 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 ATXN7O15265 892 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 DDX3YO15523 660 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 FLRT2O43155 660 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 PMPCBO75439 489 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 RECQL5O94762 991 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 STK10O94804 968 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 RBP3P10745 1247 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 RBL1P28749 1068 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 PTPN7P35236 360 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 SKOR1P84550 965 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 RALGDSQ12967 914 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 GALNT3Q14435 633 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 NOMO1Q15155 1222 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 RPS6KA1Q15418 735 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 WSCD2Q2TBF2 565 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 INAVAQ3KP66 663 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 CCDC157Q569K6 752 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 ZNF542PQ5EBM4 170 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 ALG1LQ6GMV1 187 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 CCDC70Q6NSX1 233 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 ABI3BPQ7Z7G0 1075 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 TSPAN33Q86UF1 283 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 DCP2Q8IU60 420 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 TP53I13Q8NBR0 393 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 SPATA22Q8NHS9 363 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 FAM174AQ8TBP5 190 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 PIH1D2Q8WWB5 315 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 HTR3CQ8WXA8 447 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 CENPTQ96BT3 561 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 IFT43Q96FT9 208 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 SCRN2Q96FV2 425 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 HES6Q96HZ4 224 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 SMIM14Q96QK8 99 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 KLF6Q99612 283 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 CDC6Q99741 560 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 TDRD1Q9BXT4 1180 aaKnown RBP10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 ADGRE3Q9BY15 652 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 PRORYQ9H606 182 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 GLOD4Q9HC38 313 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 RSPH14Q9UHP6 348 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 EFR3BQ9Y2G0 817 aa10.43□□□□□ -0.74
TRAPPC12-222ENST00000493792 FAM149AA5PLN7 773 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 NPIPB15A6NHN6 443 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 YKT6O15498 198 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 KCNN4O15554 427 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 PCDHGA12O60330 932 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 HEXIM1O94992 359 aaKnown RBP10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 MT-CYBP00156 380 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 SLC4A1P02730 911 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 NFKB1P19838 968 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 LHCGRP22888 699 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 ITPKBP27987 946 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 EPHA8P29322 1005 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 HNF1BP35680 557 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 WASHC5Q12768 1159 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 BNIP3Q12983 259 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 XRCC4Q13426 336 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 IHHQ14623 411 aa10.42□□□□□ -0.74
TRAPPC12-222ENST00000493792 INPP5AQ14642 412 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms