RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 SUDS3Q9H7L9 328 aaPredicted RBP21.49■■□□□ 1.03
PFDN4-205ENST00000493356 ARHGAP42A6NI28 874 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 TRAFD1O14545 582 aaPredicted RBP21.48■■□□□ 1.03
PFDN4-205ENST00000493356 FUCA1P04066 466 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 MYCLP1P12525 358 aaPredicted RBP21.48■■□□□ 1.03
PFDN4-205ENST00000493356 CD1CP29017 333 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 ILF3Q12906 894 aaKnown RBP eCLIP21.48■■□□□ 1.03
PFDN4-205ENST00000493356 ACOX1Q15067 660 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 DNAJC24Q6P3W2 148 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 PAF1Q8N7H5 531 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 ZNF564Q8TBZ8 553 aaPredicted RBP21.48■■□□□ 1.03
PFDN4-205ENST00000493356 NSMCE3Q96MG7 304 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 CINPQ9BW66 212 aaPredicted RBP21.48■■□□□ 1.03
PFDN4-205ENST00000493356 GSDMCQ9BYG8 508 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 TAAR2Q9P1P5 351 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 DACH1Q9UI36 760 aa21.48■■□□□ 1.03
PFDN4-205ENST00000493356 RELNP78509 3460 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 ANKRD62A6NC57 917 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 ECEL1O95672 775 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 CEACAM5P06731 702 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 LIMK2P53671 638 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 NSUN2Q08J23 767 aaKnown RBP eCLIP21.47■■□□□ 1.03
PFDN4-205ENST00000493356 PPP1R15BQ5SWA1 713 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 PTRH1Q86Y79 214 aaKnown RBP21.47■■□□□ 1.03
PFDN4-205ENST00000493356 IL22RA1Q8N6P7 574 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 PATE1Q8WXA2 126 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 COQ10AQ96MF6 247 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 VPS16Q9H269 839 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 CLSTN2Q9H4D0 955 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 PHPT1Q9NRX4 125 aaPredicted RBP21.47■■□□□ 1.03
PFDN4-205ENST00000493356 GPATCH2LQ9NWQ4 482 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 TRNAU1APQ9NX07 287 aaKnown RBP21.47■■□□□ 1.03
PFDN4-205ENST00000493356 B4GALT6Q9UBX8 382 aa21.47■■□□□ 1.03
PFDN4-205ENST00000493356 ZW10O43264 779 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 LIFP15018 202 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 AK4P27144 223 aaPredicted RBP21.46■■□□□ 1.03
PFDN4-205ENST00000493356 UGT1A3P35503 534 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 GPR3P46089 330 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 POLE2P56282 527 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 KCNAB2Q13303 367 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 TRA2AQ13595 282 aaKnown RBP eCLIP21.46■■□□□ 1.033e-6■■■■□ 22.5
PFDN4-205ENST00000493356 HEATR4Q86WZ0 1026 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 NUS1Q96E22 293 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 TEX101Q9BY14 249 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 FRMD8Q9BZ67 464 aaPredicted RBP21.46■■□□□ 1.03
PFDN4-205ENST00000493356 CDH19Q9H159 772 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 SEPT3Q9UH03 358 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 ST14Q9Y5Y6 855 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 B3GALT1Q9Y5Z6 326 aa21.46■■□□□ 1.03
PFDN4-205ENST00000493356 GNPDA1P46926 289 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 SCNN1BP51168 640 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 OGDHQ02218 1023 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 RFTN1Q14699 578 aaPredicted RBP21.45■■□□□ 1.02
PFDN4-205ENST00000493356 NKAIN2Q5VXU1 208 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 SLC30A9Q6PML9 568 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 ARHGAP36Q6ZRI8 547 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 ARHGAP12Q8IWW6 846 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 NAGSQ8N159 534 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 AGBL5Q8NDL9 886 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 OR4D9Q8NGE8 314 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 PTCD2Q8WV60 388 aaKnown RBP21.45■■□□□ 1.02
PFDN4-205ENST00000493356 ART4Q93070 314 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 DDA1Q9BW61 102 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 EPN3Q9H201 632 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 SP110Q9HB58 689 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 ANKMY1Q9P2S6 941 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 TUBD1Q9UJT1 453 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 SUFUQ9UMX1 484 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 AP4E1Q9UPM8 1137 aa21.45■■□□□ 1.02
PFDN4-205ENST00000493356 EEF2KO00418 725 aaKnown RBP21.44■■□□□ 1.02
PFDN4-205ENST00000493356 THRAP10827 490 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 CSF2RBP32927 897 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 AP1S1P61966 158 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 BIRC2Q13490 618 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 CNGA3Q16281 694 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 CA9Q16790 459 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 SKIDA1Q1XH10 827 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 CCDC112Q8NEF3 446 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 SPOCK2Q92563 424 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 DHX35Q9H5Z1 703 aaKnown RBP21.44■■□□□ 1.02
PFDN4-205ENST00000493356 SEPT11Q9NVA2 429 aaKnown RBP21.44■■□□□ 1.02
PFDN4-205ENST00000493356 SIK3Q9Y2K2 1263 aa21.44■■□□□ 1.02
PFDN4-205ENST00000493356 IGHV1OR21-1A0A087WYE8 117 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 DFFAO00273 331 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 PPM1DO15297 605 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 CSTF2P33240 577 aaKnown RBP eCLIP21.43■■□□□ 1.02
PFDN4-205ENST00000493356 CDK3Q00526 305 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 CTBSQ01459 385 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 IL10RBQ08334 325 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 SQSTM1Q13501 440 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 KRT31Q15323 416 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 SYCP1Q15431 976 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 DCUN1D2Q6PH85 259 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 CACNA2D3Q8IZS8 1091 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 NPWQ8N729 165 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 PSKH2Q96QS6 385 aa21.43■■□□□ 1.02
PFDN4-205ENST00000493356 USP9YO00507 2555 aaPredicted RBP21.43■■□□□ 1.02
PFDN4-205ENST00000493356 TTC24A2A3L6 582 aaPredicted RBP21.42■■□□□ 1.02
PFDN4-205ENST00000493356 EIF3CLB5ME19 914 aaKnown RBP21.42■■□□□ 1.02
PFDN4-205ENST00000493356 HEXIM1O94992 359 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms