RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 C5orf60A6NFR6 353 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 USP27XA6NNY8 438 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 TOR1BO14657 336 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 YKT6O15498 198 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 LIASO43766 372 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 ANXA9O76027 345 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 NDST3O95803 873 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 FGGP02679 453 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 GM2AP17900 193 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 PSMB4P28070 264 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 ETV3P41162 512 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 GEMP55040 296 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 YPEL5P62699 121 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 MPP3Q13368 585 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 MTM1Q13496 603 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 PDE1CQ14123 709 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-209ENST00000493166 PTK2BQ14289 1009 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 INPP5AQ14642 412 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 KDELC1Q6UW63 502 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 IPMKQ8NFU5 416 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 MAIP1Q8WWC4 291 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 C1orf54Q8WWF1 131 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 DTD2Q96FN9 168 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 OXNAD1Q96HP4 312 aaPredicted RBP12.79□□□□□ -0.36
CLIP2-209ENST00000493166 PPP1R2P1Q96PQ5 205 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 LYSMD1Q96S90 227 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 GPR27Q9NS67 375 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 PCDHGB2Q9Y5G2 931 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLIP2-209ENST00000493166 ZFC3H1O60293 1989 aaKnown RBP12.79□□□□□ -0.36
CLIP2-209ENST00000493166 PCNX2A6NKB5 2137 aa12.79□□□□□ -0.36
CLIP2-209ENST00000493166 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
CLIP2-209ENST00000493166 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 GOLGA6CA6NDK9 693 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 GOLGA6BA6NDN3 693 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 TM4SF5O14894 197 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 CLDN7O95471 211 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 SLC4A1P02730 911 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 ATP1A1P05023 1023 aaKnown RBP12.78□□□□□ -0.36
CLIP2-209ENST00000493166 C1SP09871 688 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 PIRTP0C851 137 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 GOLGA6DP0CG33 693 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 CD59P13987 128 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 KCNA4P22459 653 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 RXRGP48443 463 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 STC1P52823 247 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 PTSQ03393 145 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 SNX1Q13596 522 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 SUZ12Q15022 739 aaKnown RBP12.78□□□□□ -0.36
CLIP2-209ENST00000493166 OASLQ15646 514 aaKnown RBP12.78□□□□□ -0.36
CLIP2-209ENST00000493166 LONRF2Q1L5Z9 754 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 INAVAQ3KP66 663 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 ESRP1Q6NXG1 681 aaKnown RBP12.78□□□□□ -0.36
CLIP2-209ENST00000493166 MACC1Q6ZN28 852 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 Q6ZVL8 140 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 PARGQ86W56 976 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 NAXDQ8IW45 347 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 PLA2G15Q8NCC3 412 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 CCHCR1Q8TD31 782 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 SETD7Q8WTS6 366 aaKnown RBP12.78□□□□□ -0.36
CLIP2-209ENST00000493166 PBKQ96KB5 322 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 MRGPRX2Q96LB1 330 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 DNAJC28Q9NX36 388 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 GOLGA6AQ9NYA3 693 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 ZNF148Q9UQR1 794 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 AAR2Q9Y312 384 aaKnown RBP12.78□□□□□ -0.36
CLIP2-209ENST00000493166 OR1A2Q9Y585 309 aa12.78□□□□□ -0.36
CLIP2-209ENST00000493166 LOC285095A0A1B0GVY8 99 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 FLRT2O43155 660 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 PCDHGA12O60330 932 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 GCATO75600 419 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 EPOP01588 193 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 ITGAVP06756 1048 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 TSHRP16473 764 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 HLA-DPA1P20036 260 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 HTR1BP28222 390 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 EPHA8P29322 1005 aaPredicted RBP12.77□□□□□ -0.37
CLIP2-209ENST00000493166 GDF10P55107 478 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 FZD2Q14332 565 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 NFATC4Q14934 902 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 SHBQ15464 509 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 SIX1Q15475 284 aaPredicted RBP12.77□□□□□ -0.37
CLIP2-209ENST00000493166 SLC1A5Q15758 541 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 CCNG2Q16589 344 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 P3H1Q32P28 736 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 SIRPB2Q5JXA9 342 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 TPRG1LQ5T0D9 272 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 PNCKQ6P2M8 343 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 RFLNAQ6ZTI6 216 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 LYSMD3Q7Z3D4 306 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 DGLUCYQ7Z3D6 616 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 TECPR1Q7Z6L1 1165 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 GATAD2AQ86YP4 633 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 CBARPQ8N350 705 aaPredicted RBP12.77□□□□□ -0.37
CLIP2-209ENST00000493166 SLC25A41Q8N5S1 370 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 DEFB124Q8NES8 71 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 LRRC45Q96CN5 670 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms