RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 AGBL3Q8NEM8 1001 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 OR14A16Q8NHC5 309 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 OR14L1PQ8NHC6 308 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CREB3L4Q8TEY5 395 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 ARHGEF26Q96DR7 871 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 SLITRK1Q96PX8 696 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 KXD1Q9BQD3 176 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 PCGF1Q9BSM1 259 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 HINT3Q9NQE9 182 aaKnown RBP4.05□□□□□ -1.76
CLK1-213ENST00000492793 MYO6Q9UM54 1294 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CDC14AQ9UNH5 594 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 SESN1Q9Y6P5 492 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 hCG_1807616A0A1W2PRN6 198 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 hDV102S1A0JD36 115 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 C1orf226A1L170 272 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 K7ENM7 598 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 VCYO14598 125 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 ZIC3O60481 467 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 SERPINI2O75830 405 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 VNN2O95498 520 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 RB1P06400 928 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 CYC1P08574 325 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 TMEM11P17152 192 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 GPTP24298 496 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 GCH1P30793 250 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 ACTN2P35609 894 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 EIF2S3P41091 472 aaKnown RBP4.04□□□□□ -1.76
CLK1-213ENST00000492793 RFX2P48378 723 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 PCYT1AP49585 367 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 CREB5Q02930 508 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 USP41Q3LFD5 358 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 CFAP58Q5T655 872 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 ZC3HC1Q86WB0 502 aaKnown RBP4.04□□□□□ -1.76
CLK1-213ENST00000492793 TICAM1Q8IUC6 712 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 RPAP2Q8IXW5 612 aaPredicted RBP4.04□□□□□ -1.76
CLK1-213ENST00000492793 FAM120BQ96EK7 910 aaKnown RBP4.04□□□□□ -1.76
CLK1-213ENST00000492793 ZNF48Q96MX3 618 aaPredicted RBP4.04□□□□□ -1.76
CLK1-213ENST00000492793 FAM110AQ9BQ89 295 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 C1QTNF5Q9BXJ0 243 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 DCLK3Q9C098 648 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 CCDC68Q9H2F9 335 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 MRPL44Q9H9J2 332 aaKnown RBP4.04□□□□□ -1.76
CLK1-213ENST00000492793 ABI3Q9P2A4 366 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 TTC7AQ9ULT0 858 aaPredicted RBP4.04□□□□□ -1.76
CLK1-213ENST00000492793 RABGAP1Q9Y3P9 1069 aa4.04□□□□□ -1.76
CLK1-213ENST00000492793 COL3A1P02461 1466 aaPredicted RBP4.04□□□□□ -1.76
CLK1-213ENST00000492793 TRIP12Q14669 1992 aaPredicted RBP4.03□□□□□ -1.76
CLK1-213ENST00000492793 TAF1P21675 1872 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 A0A1W2PQF6 199 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 FRMD3A2A2Y4 597 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 CD8B2A6NJW9 211 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 J3KR12 359 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 TAF4O00268 1085 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 HS6ST1O60243 411 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 GPC4O75487 556 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 CH25HO95992 272 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 STX2P32856 288 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 HOXD13P35453 343 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 NLRP5P59047 1200 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 ADORA2A-AS1P86434 159 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 IKQ13123 557 aaPredicted RBP4.03□□□□□ -1.76
CLK1-213ENST00000492793 EIF2S3LQ2VIR3 472 aaKnown RBP4.03□□□□□ -1.76
CLK1-213ENST00000492793 LEXMQ3ZCV2 418 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 GGNBP1Q5YKI7 109 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 SIGIRRQ6IA17 410 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 CRELD2Q6UXH1 353 aaPredicted RBP4.03□□□□□ -1.76
CLK1-213ENST00000492793 SLC36A4Q6YBV0 504 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 GLDNQ6ZMI3 551 aaPredicted RBP4.03□□□□□ -1.76
CLK1-213ENST00000492793 SZRD1Q7Z422 152 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 TECPR1Q7Z6L1 1165 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 WDR63Q8IWG1 891 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 SPATA6LQ8N4H0 392 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 AADATQ8N5Z0 425 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 NSMCE1Q8WV22 266 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 JAKMIP2Q96AA8 810 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 VOPP1Q96AW1 172 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 SAT2Q96F10 170 aaPredicted RBP4.03□□□□□ -1.76
CLK1-213ENST00000492793 RRNAD1Q96FB5 475 aaKnown RBP4.03□□□□□ -1.76
CLK1-213ENST00000492793 ELMOD3Q96FG2 381 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 SLC41A2Q96JW4 573 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 LRFN5Q96NI6 719 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 C1QTNF7Q9BXJ2 289 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 CNGB3Q9NQW8 809 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 NSMCE4AQ9NXX6 385 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 PCDHGB4Q9UN71 923 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 RAI2Q9Y5P3 530 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 STON1Q9Y6Q2 735 aa4.03□□□□□ -1.76
CLK1-213ENST00000492793 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 LINC01553A4QN01 128 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 B4DLN1 442 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 HSPA12AO43301 675 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 PRSS2P07478 247 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 HOXA11P31270 313 aaPredicted RBP4.02□□□□□ -1.77
CLK1-213ENST00000492793 MXI1P50539 228 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 METAP2P50579 478 aaKnown RBP eCLIP4.02□□□□□ -1.77
CLK1-213ENST00000492793 MRPL12P52815 198 aaKnown RBP4.02□□□□□ -1.77
CLK1-213ENST00000492793 TFAP4Q01664 338 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 DSC1Q08554 894 aa4.02□□□□□ -1.77
CLK1-213ENST00000492793 ACSM2AQ08AH3 577 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms