RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 GTF2H4Q92759 462 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 TRAF4Q9BUZ4 470 aaPredicted RBP9.72□□□□□ -0.85
VPS8-225ENST00000492449 RHOBTB2Q9BYZ6 727 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 ZNF518BQ9C0D4 1074 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 SOX17Q9H6I2 414 aaPredicted RBP9.72□□□□□ -0.85
VPS8-225ENST00000492449 ZNF556Q9HAH1 456 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 WRAP73Q9P2S5 460 aaPredicted RBP9.72□□□□□ -0.85
VPS8-225ENST00000492449 TCRBV5S2A0A599 114 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 GOLGA8JA6NMD2 632 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 OR5K4A6NMS3 321 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 PLK4O00444 970 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 MRASO14807 208 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 NOS1APO75052 506 aaPredicted RBP9.72□□□□□ -0.85
VPS8-225ENST00000492449 CDK14O94921 469 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 PIGNO95427 931 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 NTSR2O95665 410 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 PRLP01236 227 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 MLNP12872 115 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 RAP1GAPP47736 663 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 ETV1P50549 477 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 SLC7A2P52569 658 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 SNTA1Q13424 505 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 DDR2Q16832 855 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 ARL13AQ5H913 290 aaPredicted RBP9.72□□□□□ -0.85
VPS8-225ENST00000492449 ILDR2Q71H61 639 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 P2RY8Q86VZ1 359 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 PLCZ1Q86YW0 608 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 TNS4Q8IZW8 715 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 LRRC47Q8N1G4 583 aaKnown RBP9.72□□□□□ -0.85
VPS8-225ENST00000492449 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.72□□□□□ -0.85
VPS8-225ENST00000492449 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 SGCDQ92629 289 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 PMEPA1Q969W9 287 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 NODALQ96S42 347 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 HOPXQ9BPY8 73 aaPredicted RBP9.72□□□□□ -0.85
VPS8-225ENST00000492449 PI4K2AQ9BTU6 479 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 MRM3Q9HC36 420 aaKnown RBP9.72□□□□□ -0.85
VPS8-225ENST00000492449 ZNF358Q9NW07 568 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 B3GNT2Q9NY97 397 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 PCDHA1Q9Y5I3 950 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 ROBO1Q9Y6N7 1651 aa9.72□□□□□ -0.85
VPS8-225ENST00000492449 ZFC3H1O60293 1989 aaKnown RBP9.71□□□□□ -0.85
VPS8-225ENST00000492449 METTL15A6NJ78 407 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 BBIP1A8MTZ0 92 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 PDHXO00330 501 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 NRP2O60462 931 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 APRTP07741 180 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 LRPAP1P30533 357 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 CDH5P33151 784 aaPredicted RBP9.71□□□□□ -0.85
VPS8-225ENST00000492449 GGT5P36269 586 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 ZNF76P36508 570 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 RPS5P46782 204 aaKnown RBP9.71□□□□□ -0.85
VPS8-225ENST00000492449 ATP4BP51164 291 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 DSC3Q14574 896 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 QRICH1Q2TAL8 776 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 BRDTQ58F21 947 aaPredicted RBP9.71□□□□□ -0.85
VPS8-225ENST00000492449 SYT6Q5T7P8 510 aaPredicted RBP9.71□□□□□ -0.85
VPS8-225ENST00000492449 TTC23Q5W5X9 447 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 KCTD1Q719H9 257 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 BEND5Q7L4P6 421 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 PLD6Q8N2A8 252 aaKnown RBP9.71□□□□□ -0.85
VPS8-225ENST00000492449 SETD6Q8TBK2 473 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 AGR3Q8TD06 166 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 CPNE1Q99829 537 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 FEM1AQ9BSK4 669 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 TEX13BQ9BXU2 312 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 FAM49AQ9H0Q0 323 aaPredicted RBP9.71□□□□□ -0.85
VPS8-225ENST00000492449 SCPEP1Q9HB40 452 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 CHST12Q9NRB3 414 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 ASNSD1Q9NWL6 643 aa9.71□□□□□ -0.85
VPS8-225ENST00000492449 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.71□□□□□ -0.85
VPS8-225ENST00000492449 MTF2Q9Y483 593 aaPredicted RBP9.71□□□□□ -0.85
VPS8-225ENST00000492449 ATP6V1G2-DDX39BF2Z307 99 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 PRSS23O95084 383 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 EPN2O95208 641 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 LTFP02788 710 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 ITGA2P17301 1181 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 OXTRP30559 389 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 GP5P40197 560 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 VBP1P61758 197 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 EPS8Q12929 822 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 FASTKQ14296 549 aaKnown RBP9.71□□□□□ -0.86
VPS8-225ENST00000492449 STARD3Q14849 445 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 ACAP2Q15057 778 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 ZNF404Q494X3 552 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 PRR23BQ6ZRT6 265 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 SPPL2CQ8IUH8 684 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 KDM1BQ8NB78 822 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 TTLQ8NG68 377 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 BLOC1S5Q8TDH9 187 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 FBLIM1Q8WUP2 373 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 SNAPC3Q92966 411 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 HSFY1Q96LI6 401 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 MCMBPQ9BTE3 642 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 ADNPQ9H2P0 1102 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 NMRAL1Q9HBL8 299 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.86
VPS8-225ENST00000492449 IRS2Q9Y4H2 1338 aa9.7□□□□□ -0.86
VPS8-225ENST00000492449 CLDN24A6NM45 220 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms