RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 NRROSQ86YC3 692 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 WDR36Q8NI36 951 aaKnown RBP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 FAF2Q96CS3 445 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 DTD2Q96FN9 168 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 PDXPQ96GD0 296 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 FCRL3Q96P31 734 aaPredicted RBP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 THSD1Q9NS62 852 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 MYO1AQ9UBC5 1043 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 B4GALT6Q9UBX8 382 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 GPR34Q9UPC5 381 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 SLC17A4Q9Y2C5 497 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 PCDHGC4Q9Y5F7 938 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 PCDHGA7Q9Y5G6 932 aa8.39□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF462Q96JM2 2506 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CCDC187A0A096LP49 1063 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 PRSS38A1L453 326 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 NPIPB15A6NHN6 443 aaPredicted RBP8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 D6RAR5 112 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 MYO1FO00160 1098 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CACNB4O00305 520 aaPredicted RBP8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 NUDT21O43809 227 aaKnown RBP8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 SOD1P00441 154 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 PRLP01236 227 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 PCCBP05166 539 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 ITGA2BP08514 1039 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CD48P09326 243 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CTSEP14091 401 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CES1P23141 567 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 VIPR1P32241 457 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 SERPINB6P35237 376 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 GARSP41250 739 aaKnown RBP8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 MMP13P45452 471 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 UCNP55089 124 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 UBASH3AP57075 661 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CCL7P80098 99 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 B4GALNT1Q00973 533 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 PTSQ03393 145 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CCDC173Q0VFZ6 552 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 GALNT2Q10471 571 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 SQSTM1Q13501 440 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 SPIDRQ14159 915 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 MARC1Q5VT66 337 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 ALKBH5Q6P6C2 394 aaKnown RBP8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 HSD11B1LQ7Z5J1 315 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 B3GNT8Q7Z7M8 397 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CCL4L1Q8NHW4 92 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 HSPH1Q92598 858 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 CCDC74AQ96AQ1 378 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 LYSMD1Q96S90 227 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 NUP85Q9BW27 656 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 FRMD8Q9BZ67 464 aaPredicted RBP8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 B3GNT4Q9C0J1 378 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 TMEM168Q9H0V1 697 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 LRRN3Q9H3W5 708 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 WDR26Q9H7D7 661 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 TRNAU1APQ9NX07 287 aaKnown RBP8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 AMACRQ9UHK6 382 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 ANAPC7Q9UJX3 599 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 LUC7L2Q9Y383 392 aaKnown RBP8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 ST14Q9Y5Y6 855 aa8.38□□□□□ -1.07
SMARCB1-207ENST00000491967 PIEZO2Q9H5I5 2752 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 SYCE3A1L190 88 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF487B1APH4 448 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ERVH48-1M5A8F1 160 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 PLD2O14939 933 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 MATN3O15232 486 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 NVLO15381 856 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 EFSO43281 561 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 FGF1P05230 155 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 IVLP07476 585 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 PDHA1P08559 390 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 CCNCP24863 283 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 RBMS1P29558 406 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 MAN1A1P33908 653 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ETV3P41162 512 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 TMPRSS3P57727 454 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 RPL26P61254 145 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 CDK3Q00526 305 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 MMRN1Q13201 1228 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 DPYSL3Q14195 570 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF235Q14590 738 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ACOX1Q15067 660 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 PDK2Q15119 407 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 PTPRRQ15256 657 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 CLPPQ16740 277 aaPredicted RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 TSR1Q2NL82 804 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ATP13A4Q4VNC1 1196 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 C14orf28Q4W4Y0 310 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ANKRD20A8PQ5CZ79 823 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 C3orf38Q5JPI3 329 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 NCBP2-AS2Q69YL0 99 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 SPECC1LQ69YQ0 1117 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 CRTC1Q6UUV9 634 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 Q6ZVL8 140 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 RD3Q7Z3Z2 195 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 SPRED1Q7Z699 444 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 HEATR4Q86WZ0 1026 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 VSIG1Q86XK7 387 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms