RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 FAM46DQ8NEK8 389 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 GPR156Q8NFN8 814 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 SNRNP27Q8WVK2 155 aaKnown RBP8.77□□□□□ -1.01
NUP50-217ENST00000491860 HSPH1Q92598 858 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 FUBP1Q96AE4 644 aaKnown RBP8.77□□□□□ -1.01
NUP50-217ENST00000491860 CCDC74AQ96AQ1 378 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 SCRN2Q96FV2 425 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 PDXPQ96GD0 296 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 ATXN7L3BQ96GX2 97 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 COQ10AQ96MF6 247 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CSPG4P5Q96PW8 444 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 DPYSL5Q9BPU6 564 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 GSDMCQ9BYG8 508 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 B3GNT4Q9C0J1 378 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 POLR1EQ9GZS1 481 aaKnown RBP8.77□□□□□ -1.01
NUP50-217ENST00000491860 LRRN3Q9H3W5 708 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 TRNAU1APQ9NX07 287 aaKnown RBP8.77□□□□□ -1.01
NUP50-217ENST00000491860 B4GALT6Q9UBX8 382 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 ANAPC7Q9UJX3 599 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 CAPN11Q9UMQ6 739 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 PPIL1Q9Y3C6 166 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 PCDHGA7Q9Y5G6 932 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.77□□□□□ -1.01
NUP50-217ENST00000491860 COL6A6A6NMZ7 2263 aa8.77□□□□□ -1.01
NUP50-217ENST00000491860 ARHGEF17Q96PE2 2063 aaPredicted RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 PRSS38A1L453 326 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 KLK10O43240 276 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 MAFKO60675 156 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 HEXIM1O94992 359 aaKnown RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 CYP1A2P05177 515 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 RPLP0P05388 317 aaKnown RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 RARAP10276 462 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 SKILP12757 684 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 MX2P20592 715 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 AMPD1P23109 780 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 CD82P27701 267 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 RGRP47804 291 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 INHBCP55103 352 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 RPL26P61254 145 aaKnown RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 SKOR1P84550 965 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 FANCCQ00597 558 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 DPTQ07507 201 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 VAC14Q08AM6 782 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 SLC10A7Q0GE19 358 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 BIRC2Q13490 618 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 TRIM14Q14142 442 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 PDK2Q15119 407 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 IFI16Q16666 785 aaKnown RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 SMTNL2Q2TAL5 461 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 CERCAMQ5T4B2 595 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 HGSNATQ68CP4 663 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 ALKBH5Q6P6C2 394 aaKnown RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 XKR5Q6UX68 686 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 CCNJLQ8IV13 435 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 FBXO39Q8N4B4 442 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 NETO2Q8NC67 525 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 FAM71BQ8TC56 605 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 PDCD6IPQ8WUM4 868 aaKnown RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 DTD2Q96FN9 168 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 NAP1L5Q96NT1 182 aaPredicted RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 MCCC1Q96RQ3 725 aaPredicted RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 ZNF670Q9BS34 389 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 NUP85Q9BW27 656 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 TEX101Q9BY14 249 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 TRIM7Q9C029 511 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 DPEP2Q9H4A9 486 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 SYNDIG1Q9H7V2 258 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 PCDH18Q9HCL0 1135 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 CYP4F12Q9HCS2 524 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 SEPT10Q9P0V9 454 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 SIRPGQ9P1W8 387 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 UVRAGQ9P2Y5 699 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 ACSL6Q9UKU0 697 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 PNMA8BQ9ULN7 279 aaPredicted RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 RPL26L1Q9UNX3 145 aaKnown RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 PCDHGC4Q9Y5F7 938 aa8.76□□□□□ -1.01
NUP50-217ENST00000491860 COL27A1Q8IZC6 1860 aaPredicted RBP8.76□□□□□ -1.01
NUP50-217ENST00000491860 TMEM202A6NGA9 273 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 TNFSF15O95150 251 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 PGLSO95336 258 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 PEX11BO96011 259 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 IVLP07476 585 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 H2AFZP0C0S5 128 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 JMJD7P0C870 316 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CCNB1P14635 433 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CCNCP24863 283 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 IL1R2P27930 398 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 GARSP41250 739 aaKnown RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 SSR1P43307 286 aaKnown RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 GPR3P46089 330 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 EPHB1P54762 984 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 SLC25A11Q02978 314 aaKnown RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 HLTFQ14527 1009 aaKnown RBP eCLIP8.75□□□□□ -1.01
NUP50-217ENST00000491860 PAFAH1B3Q15102 231 aaKnown RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 NFKBIBQ15653 356 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 CNGA3Q16281 694 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 TAF1BQ53T94 588 aaPredicted RBP8.75□□□□□ -1.01
NUP50-217ENST00000491860 TMEM164Q5U3C3 297 aa8.75□□□□□ -1.01
NUP50-217ENST00000491860 E4F1Q66K89 784 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms