RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 TBC1D25Q3MII6 688 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 PERM1Q5SV97 790 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 KCTD16Q68DU8 428 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 MFSD7Q6UXD7 560 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 EFL1Q7Z2Z2 1120 aaKnown RBP11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 ZSWIM9Q86XI8 627 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 CPNE8Q86YQ8 564 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 CACTIN-AS1Q8N1I8 211 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 ATPAF2Q8N5M1 289 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 ASB12Q8WXK4 309 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 HAUS1Q96CS2 278 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 CELF6Q96J87 481 aaKnown RBP11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 ZNF599Q96NL3 588 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 LRRC61Q9BV99 259 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 DUSP23Q9BVJ7 150 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 C1QTNF7Q9BXJ2 289 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 OSBPL8Q9BZF1 889 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 USP29Q9HBJ7 922 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 UBA2Q9UBT2 640 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 HEY1Q9Y5J3 304 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 CAPN6Q9Y6Q1 641 aa11.09□□□□□ -0.63
TMEM39A-211ENST00000491685 J3KR12 359 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 MTSS1O43312 755 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 IGSF6O95976 241 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 CES1P23141 567 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 GNG11P61952 73 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 GABREP78334 506 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 GRM3Q14832 879 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 MARC1Q5VT66 337 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 AFMIDQ63HM1 303 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 SLC9A4Q6AI14 798 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 ZCCHC8Q6NZY4 707 aaKnown RBP11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 ZNF605Q86T29 641 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 TTC7BQ86TV6 843 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 PHACTR4Q8IZ21 702 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 PLD5Q8N7P1 536 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 CXorf40AQ8TE69 158 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 KRT35Q92764 455 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 NAF1Q96HR8 494 aaKnown RBP11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 PBKQ96KB5 322 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 TSGA13Q96PP4 275 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 NAP1L3Q99457 506 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 HEMGNQ9BXL5 484 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 CLPBQ9H078 707 aa11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 APOBEC3BQ9UH17 382 aaKnown RBP11.08□□□□□ -0.64
TMEM39A-211ENST00000491685 hCG_1818297A0A087WSY0 165 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TSPAN11A1L157 253 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 CPED1A4D0V7 1026 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 C3orf70A6NLC5 250 aaPredicted RBP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 HACD1B0YJ81 288 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TOR1BO14657 336 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 RRP8O43159 456 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 PRAMEF11O60813 436 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 USP12O75317 370 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TM7SF2O76062 418 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 GP1BAP07359 652 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 PYGMP11217 842 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 KRT10P13645 584 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 PTPN7P35236 360 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 HSPA9P38646 679 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 GARSP41250 739 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 SUOXP51687 545 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 PDX1P52945 283 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 DYNLT1P63172 113 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TLE3Q04726 772 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 NSUN2Q08J23 767 aaKnown RBP eCLIP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 XRCC4Q13426 336 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TUBB2AQ13885 445 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TAZQ16635 292 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TMEM52BQ4KMG9 183 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 PRRT3Q5FWE3 981 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 NCBP2-AS2Q69YL0 99 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 MACC1Q6ZN28 852 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 LRRC69Q6ZNQ3 347 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 ARHGAP36Q6ZRI8 547 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 ARHGAP12Q8IWW6 846 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 SPACA3Q8IXA5 215 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TP53INP2Q8IXH6 220 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 SLC35F3Q8IY50 421 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 ZNF843Q8N446 348 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 NPWQ8N729 165 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 PQLC3Q8N755 202 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 MAPK15Q8TD08 544 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TFB1MQ8WVM0 346 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 FGF11Q92914 225 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 NSMCE3Q96MG7 304 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 FCRL3Q96P31 734 aaPredicted RBP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 DEPDC7Q96QD5 511 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 TUBB2BQ9BVA1 445 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 CINPQ9BW66 212 aaPredicted RBP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 BOCQ9BWV1 1114 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 FRMD8P1Q9BZ68 369 aaPredicted RBP11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 CARD9Q9H257 536 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 ASCL3Q9NQ33 180 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 HOMER3Q9NSC5 361 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 SEPT3Q9UH03 358 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 AMACRQ9UHK6 382 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 PYCARDQ9ULZ3 195 aa11.07□□□□□ -0.64
TMEM39A-211ENST00000491685 PACSIN2Q9UNF0 486 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms